Query= MSMg01no076_h14.b1 MSMg01no076_h14.b1 CHROMAT_FILE:
MSMg01no076_h14.b1 PHD_FILE: MSMg01no076_h14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:27 2005
(547 letters)
>mm_chr11_95039337_95040282
Length = 946
Score = 1011 bits (523), Expect = 0.0
Identities = 540/547 (98%), Gaps = 3/547 (0%)
Strand = Plus / Plus
Query: 1 agttgtgttatttttaaataaaaaaataataacaacaacaataataacaacaacccaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 agttgtgttatttttaaataaaaaaataataacaacaacaataataacaacaacccaggg 262
Query: 61 tctagaaatctagcttacatttgcctagcatccacaaggccatgggttcagtacccagca 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tctggaaatctagcttacatttgcctagcatccacaaggccatgggttcagtacccagca 322
Query: 121 ccatataaaactgggtgtggtggtgcacacctgtgatcccagcactcaggacatagagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ccatataaaactgggtgtggtggtgcacacctgtgatcccagcactcaggacatagagac 382
Query: 181 agaagggtcagaagttccaggttatcctcagctacatgggcaatttaaggcctgccctac 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 383 agaagggtcagaagttccaggttatcctcagttacatgggcaatttaaggcctgccctac 442
Query: 241 attcctgtgatcttgtctcaaaaacaaaaatgaacacacaacacctgccctgctcctgtt 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 443 attcctgtgatcttgtctcaaaaacaaaaatgaacacaca---cctgccctgctcctgtt 499
Query: 301 gtatgaaagacttggcacacatgtcacctctttcttgcactgtgtacggaacgcaaggct 360
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtatgaaagactcggcacacacgtcacctctttcttgcactgtgtacggaacgcaaggct 559
Query: 361 tctcacaggagagacaggcaccccatcagccacccacactcctagcccatacacatttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tctcacaggagagacaggcaccccatcagccacccacactcctagcccatacacatttct 619
Query: 421 attccaccccagcacttgtataaattccacattcactctgaggtggaggcaaggtttctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 attccaccccagcacttgtataaattccacattcactctgaggtggaggcaaggtttctt 679
Query: 481 tttacatatcaaaaacttaagaggaagaagcccttgactggggctctgtctgtgttagtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tttacatatcaaaaacttaagaggaagaagcccttgactggggctctgtctgtgttagtc 739
Query: 541 ccaaggg 547
|||||||
Sbjct: 740 ccaaggg 746
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 946
Length adjustment: 10
Effective length of query: 537
Effective length of database: 936
Effective search space: 502632
Effective search space used: 502632
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_h14.g1 MSMg01no076_h14.g1 CHROMAT_FILE:
MSMg01no076_h14.g1 PHD_FILE: MSMg01no076_h14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:27 2005
(465 letters)
>mm_chr11_95141123_95141987
Length = 865
Score = 853 bits (441), Expect = 0.0
Identities = 459/465 (98%)
Strand = Plus / Minus
Query: 1 atttctcaactataatgtctcgtgcatcctcaccatgcctcagtacatgcgacagggcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 atttctcaactataatgtctcgtgcatcctcaccatgcctcagtacatgcgacagggcta 606
Query: 61 cgggaagatgctgatcgatttcagtaagtggtgttgccgagcatcggctcctcgggccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 cgggaagatgctgatcgatttcagtaagtggtgttgccgagcatcggctcctcgggccct 546
Query: 121 ggccctgagggttggggttgctcacttgtgtcctctgctcttaacagttcctaacatgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ggccctgagggttggggttgctcacttgtgtcctctgctcttaacagttcctaacatgta 486
Query: 181 atcacaggtagttagtgaatgaacaaagtggggaaatgagtcgctagggaattagtagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 atcacaggtagttagtgaatgaacaaagtggggaaatgagtcgctagggaattagtagga 426
Query: 241 gatgcagggaacaatacagccgtgctggattatcccgcctgagactgaggtagagcagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gatgcagggaacaatacagccgtgctggattatcccgcctgagactgaggtagagcagat 366
Query: 301 gcatacctgtggcttaaataaagcctggctttgatgcttgccctcttatgtaagcacttg 360
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 365 gcatgcctgtggcttaaataaagcctggctttgatgcttggggtcttatgtaagcacttg 306
Query: 361 tggaggtaatccaggtacctggttaaggctttggtgttatagtcattcttcattactcat 420
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tggaggtaacccaggtacctggttaaggctttggtgttatagtcattcttcattactcat 246
Query: 421 gggtatcgatttgaatttgtctaccctctgatgtgcaactctcag 465
||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 245 gggtatcgatttgaatttgtctaccctctgatgtgtaactctcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
