Query= MSMg01no076_h16.b1 MSMg01no076_h16.b1 CHROMAT_FILE:
MSMg01no076_h16.b1 PHD_FILE: MSMg01no076_h16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:28 2005
(455 letters)
>mm_chr11_111731738_111732592
Length = 855
Score = 830 bits (429), Expect = 0.0
Identities = 448/455 (98%), Gaps = 2/455 (0%)
Strand = Plus / Minus
Query: 1 ccacacaatagaaagagagatgcaactcctgtaagctgtcacatttctcctacgtagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ccacacaatagaaagagagatgcaactcctgtaagctgtcacatttctcctacgtagctc 449
Query: 61 tttggcacacactccactcttcacatgtaataagtctttaaaattatagtttgggacttg 120
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 448 tttggcacacactccactcttcacatgtaataagtctttaaaattgcagtttgggacttg 389
Query: 121 gagaaattaatatgaaagtgggaaaagcaaatgacccattagtggttacaatttggagtt 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gagaaattcatatgaaagtgggaaaagcaaatgacccattagtggttacaatttggagtt 329
Query: 181 agggaaaatcaaaatataaaatataaaaagaaaagcattttgtaaatgtcagctgattta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 agggaaaatcaaaatataaaatataaaaagaaaagcattttgtaaatgtcagctgattta 269
Query: 241 tatctccatagtaaggtacttacatagcatgcaatccacagcaggtcccagcaagctcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tatctccatagtaaggtacttacatagcatgcaatccacagcaggtcccagcaagctcaa 209
Query: 301 acccccagtattatataaacaaataaataaaaaaaaaaatcacaaaaggacagctagcca 360
|||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||
Sbjct: 208 acccccagtattatataaacaaataaat--aaaaaaaaatcacaaaaggaaagttagcca 151
Query: 361 aaggataccaaaatagctctttggaagagatacttccacatttgaactcaaacccttgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 aaggataccaaaatagctctttggaagagatacttccacatttgaactcaaacccttgta 91
Query: 421 aaagtgaattggatagaaaatctggaagaaggttc 455
|||||||||||||||||||||||||||||||||||
Sbjct: 90 aaagtgaattggatagaaaatctggaagaaggttc 56
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_h16.g1 MSMg01no076_h16.g1 CHROMAT_FILE:
MSMg01no076_h16.g1 PHD_FILE: MSMg01no076_h16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:28 2005
(339 letters)
>mm_chr11_111613014_111613754
Length = 741
Score = 617 bits (319), Expect = 0.0
Identities = 335/341 (98%), Gaps = 2/341 (0%)
Strand = Plus / Plus
Query: 1 agccccccattatctaggaacatgctgccaacccagtgctagggaggtagagacagggta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agccccccattatctaggaacatgctgccaacccagtgctagggaggtagagacagggta 260
Query: 61 gcccctggggttcactggctagctagtctagatgagctccaggttcagtgggagaggaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcccctggggttcactggctagctagtctagatgagctccaggttcagtgggagaggaaa 320
Query: 121 tatggcagacatgtctctggcctctgtaatcatcagcatacgtgtcaacacaagcaaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatggcagacatgtctctggcctctgtaatcatcagcatacgtgtcaacacaagcaaggc 380
Query: 181 aggtggtgggcttcttcctaagtgttgt--gtcaatatacaagaagtgacacctgcttta 238
|||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 381 aggtggtgggcttcttcctaagtgttgtaagtcaatatataagaagtgacacctgcttta 440
Query: 239 ccactcgtaaggtacccgtaggccagtcacagtgcttcttgctcagttggcttatgctga 298
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 ccactcgtaaggcacccgtaggccagtcacagtgcttcttgctcatttggcttatgctga 500
Query: 299 ccatccagcaccacagaccccaagagtagagagtggcatgt 339
|||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 ccatccagcaccacagaccccatgagtagagagtggcatgt 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 741
Length adjustment: 9
Effective length of query: 330
Effective length of database: 732
Effective search space: 241560
Effective search space used: 241560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|