XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
CTATGTCATGCACATTTAACCATAGGATGAGATGGGGCTGCCCACCACAG
ATGGCCCATTCTGAGATAATATATTTTTCCAGTTTTGTGGTTATTCCCAG
GTTATTCTTGGTAGGGGGTTCTATGGTCCTGTTCTGGAGTTTATGGTCTG
TTCCTGGAGCTGGTGTCTTATGGCCTAGCTTCTGGGGCTTATGGTCTGTT
TTTGGAGCTAGTGCCTATGGCCTTTTTGAAGTCAGATCTGGTCCTTAAAT
GGAGACAAATAGGGTTTATGCCTTCGTTTCACCTGAATCCCAGTATAAGG
TTTGAGAAATACATCATTTAGACCCAAGTTACCAAGTGAAGAATGCAAGG
TGGAATATCCTATAAAGGCAAGAGGTTCTGTGTGAGGTTACTGGGACAGG
TACATGGTCCTAGCTAGGAAGAGGAGGGAGTGGAGAGCCAGTTGTAGCTA
GAGACATGACAGGAGTAAGCCGCTATAGTCCTTGGTGAGGACTCATAGTT
TCGGCTCTTCTGCGTTGGTGTATGTGAGAAATATCAGCCTTATTCTCACA
AATTTAATTGGTTTGTCTTCAGTCGATGGCTCGTGTGGCGCTTTACATGA
TTTTAGTTTCTTTAGACCATGCGTGTAAATGCTTGGCCTCTTTTGCTTTT
TCCGCTCTGCATTATCAAG

ACTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTCTGTTTAACTTGGAAATATCATCCCGAG
TGAGGTAGGCCAGTTACAAAAGAACACACATGGTATGCATTCACTGATAA
GTGGATATTAGCCAAAAAGTTTGAAATACCCAAGATACAACTCACAGACC
ATATGAAACTCAAGAAGAAAGAAGACCAAAGTGTGGATGCTTCAGTGCTT
CTTAGAAGGGTGAGCAAAATACAGGAGGAAATATGGAGACAAAATGTGGA
GCAGTGTCTGAAGGAAAGGCCATCCAGAGACTGTCCCACCTATGGACCCA
TCCCATATACAGTCACCAAACCCAGTCACTATTGTGGATGCTGGAAACTG
TTTGCTGACAGGAGCCTGATATGGCTGTCTCCTGAGAGGCTTTACCAGAT
CTTGACAAATACAGAGACAGATGCTTGCAGCCAACCATTGGACTTAGTTC
AGGGTCCCTGATGGAGGAATTGGAGAAGGGACTGAAGGAGCTGAGTGGTT
TTGCAGCCCTGCGTGTGTGGTGGGGGGAGCAACTAGTGTCAACCAATCAG
ATCCCTGGAGCTCCCAGGAACTGGATCTCCATCTACAGAGTATTCTTGGA
GGGATTCATGTTTCCAGTCCATTATGTACCATAGGATGCCTTTGTTGGAC
TTTAGTGGCACAACCGCTCCTTGTC

Query= MSMg01no078_m17.b1 MSMg01no078_m17.b1 CHROMAT_FILE:
MSMg01no078_m17.b1 PHD_FILE: MSMg01no078_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:13 2005
         (470 letters)



>mm_chr11_56448562_56449431
          Length = 870

 Score =  886 bits (458), Expect = 0.0
 Identities = 464/466 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctatgtcatgcacatttaaccataggatgagatggggctgcccaccacagatgg 64
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gaattcctatgtcatgaacatttaaccataggatgagatggggctgcccaccacagatgg 611

                                                                       
Query: 65  cccattctgagataatatatttttccagttttgtggttattcccaggttattcttggtag 124
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 cccattctgagataagatatttttccagttttgtggttattcccaggttattcttggtag 551

                                                                       
Query: 125 ggggttctatggtcctgttctggagtttatggtctgttcctggagctggtgtcttatggc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 ggggttctatggtcctgttctggagtttatggtctgttcctggagctggtgtcttatggc 491

                                                                       
Query: 185 ctagcttctggggcttatggtctgtttttggagctagtgcctatggcctttttgaagtca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ctagcttctggggcttatggtctgtttttggagctagtgcctatggcctttttgaagtca 431

                                                                       
Query: 245 gatctggtccttaaatggagacaaatagggtttatgccttcgtttcacctgaatcccagt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gatctggtccttaaatggagacaaatagggtttatgccttcgtttcacctgaatcccagt 371

                                                                       
Query: 305 ataaggtttgagaaatacatcatttagacccaagttaccaagtgaagaatgcaaggtgga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ataaggtttgagaaatacatcatttagacccaagttaccaagtgaagaatgcaaggtgga 311

                                                                       
Query: 365 atatcctataaaggcaagaggttctgtgtgaggttactgggacaggtacatggtcctagc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 atatcctataaaggcaagaggttctgtgtgaggttactgggacaggtacatggtcctagc 251

                                                         
Query: 425 taggaagaggagggagtggagagccagttgtagctagagacatgac 470
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 taggaagaggagggagtggagagccagttgtagctagagacatgac 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space:   395600
Effective search space used:   395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)