Query= MSMg01no079_c23.b1 MSMg01no079_c23.b1 CHROMAT_FILE:
MSMg01no079_c23.b1 PHD_FILE: MSMg01no079_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:44 2005
(339 letters)
>mm_chr11_61865739_61866477
Length = 739
Score = 632 bits (327), Expect = 0.0
Identities = 336/339 (99%)
Strand = Plus / Plus
Query: 1 aaacaggagaagattggcttctaagcagctaggaagatgatctctcaaagcccaccccta 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 aaacaggagaagattggcttctaagcagctaggaagatggtctctcaaagcccaccccta 260
Query: 61 cagtgacacacttcctccaacaaggccccctcctaatagtgccattttctgggccaggca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 cagtgacacacttcctccaacaaggccccctcctaatagtgccattttctgggccaagca 320
Query: 121 tattcaaaccaccacaatagtcctccatgaagtgtagtcaaaagcaaaggaatcctgcat 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattcaaaccatcacaatagtcctccatgaagtgtagtcaaaagcaaaggaatcctgcat 380
Query: 181 gactctcggcaggtgcttcatatagaggcttcaccctgtagctcagtttctttctgcatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gactctcggcaggtgcttcatatagaggcttcaccctgtagctcagtttctttctgcatg 440
Query: 241 gtggacattttgtaaaagcatcctttaatgtcctgaagtgaaattgatgagtctataaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtggacattttgtaaaagcatcctttaatgtcctgaagtgaaattgatgagtctataaat 500
Query: 301 gtggctgaaaaaaaaattaatgccttacctgaactatag 339
|||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtggctgaaaaaaaaattaatgccttacctgaactatag 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_c23.g1 MSMg01no079_c23.g1 CHROMAT_FILE:
MSMg01no079_c23.g1 PHD_FILE: MSMg01no079_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:44 2005
(538 letters)
>mm_chr11_62018355_62019292
Length = 938
Score = 472 bits (244), Expect = e-137
Identities = 247/248 (99%)
Strand = Plus / Minus
Query: 1 ttgcttatccccatagggagcctttaaggcctaatataaatcttatttcaaattactccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ttgcttatccccatagggagcctttaaggcctaatataaatcttatttcaaattactccc 255
Query: 61 cagataagcattgtatatccagcatttcccagacttactggccaaggaagaacaatcatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 cagataagcattgtatatccagcatttcccagacttactggccaaggaagaacaatcatc 195
Query: 121 acaatcatcaccaccaccatcatcactactatctccatcatcaaaaccaccatcatcatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 acaatcatcaccaccaccatcatcactactatctccatcatcaaaaccaccatcatcatc 135
Query: 181 actactattatcaacatcaccaccaccaccactgtgtccatcaccatcatcatcaccacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 actactattatcaacatcaccaccaccaccactgtgtccatcaccatcatcatcaccacc 75
Query: 241 accaccac 248
|| |||||
Sbjct: 74 actaccac 67
Score = 99.3 bits (51), Expect = 6e-25
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 478 atcatcatcaccaccaccaccactgtgtccatcaccatcatcatcaccaccaccaccac 536
|||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 125 atcaacatcaccaccaccaccactgtgtccatcaccatcatcatcaccaccactaccac 67
Score = 99.3 bits (51), Expect = 6e-25
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 442 atcatcatcaccaccaccaccactgtgtccatcaccatcatcatcaccaccaccaccac 500
|||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 125 atcaacatcaccaccaccaccactgtgtccatcaccatcatcatcaccaccactaccac 67
Score = 99.3 bits (51), Expect = 6e-25
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 406 atcatcatcaccaccaccaccactgtgtccatcaccatcatcatcaccaccaccaccac 464
|||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 125 atcaacatcaccaccaccaccactgtgtccatcaccatcatcatcaccaccactaccac 67
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 65
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 4
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space: 489984
Effective search space used: 489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
