Query= MSMg01no079_c24.b1 MSMg01no079_c24.b1 CHROMAT_FILE:
MSMg01no079_c24.b1 PHD_FILE: MSMg01no079_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:44 2005
(514 letters)
>mm_chr11_61865741_61866654
Length = 914
Score = 940 bits (486), Expect = 0.0
Identities = 507/514 (98%)
Strand = Plus / Plus
Query: 1 acaggagaagattggcttctaagcagctaggaagatgatctctcaaagcccacccctaca 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 acaggagaagattggcttctaagcagctaggaagatggtctctcaaagcccacccctaca 260
Query: 61 gtgacacacttcctccaacaaggccccctcctaatagtgccattttctgggccaggcata 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 gtgacacacttcctccaacaaggccccctcctaatagtgccattttctgggccaagcata 320
Query: 121 ttcaaaccaccacaatagtcctccatgaagtgtagtcaaaagcaaaggaatcctgcatga 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcaaaccatcacaatagtcctccatgaagtgtagtcaaaagcaaaggaatcctgcatga 380
Query: 181 ctctcggcaggtgcttcatatagaggcttcaccctgtagctcagtttctttctgcatggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctcggcaggtgcttcatatagaggcttcaccctgtagctcagtttctttctgcatggt 440
Query: 241 ggacattttgtaaaagcatcctttaatgtcctgaagtgaaattgatgagtctataaatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggacattttgtaaaagcatcctttaatgtcctgaagtgaaattgatgagtctataaatgt 500
Query: 301 ggctgaaaaaaaaattaatgccttacctgaactatagaacacaaagaataggaaaccaga 360
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 501 ggctgaaaaaaaaattaatgccttacctgaactatagaagagaaagaataggaaaccaga 560
Query: 361 tcctaatgaagtagcattgtggatgagcagcaggcccctggctccctcagaaggagggga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcctaatgaagtagcattgtggatgagcagcaggcccctggctccctcagaaggagggga 620
Query: 421 atgcctacacactgtgtagactctgtcagaagaaactgctgcacatgagactgacagcac 480
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgcctacacactgtatagactctgtcagaagaaactgctgcacatgagactgacagcac 680
Query: 481 cagccagcaagccgcactaagcagtgctgcagga 514
||||||||||||||| ||||||||||||||||||
Sbjct: 681 cagccagcaagccgcgctaagcagtgctgcagga 714
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_c24.g1 MSMg01no079_c24.g1 CHROMAT_FILE:
MSMg01no079_c24.g1 PHD_FILE: MSMg01no079_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:44 2005
(506 letters)
>mm_chr11_62018355_62019260
Length = 906
Score = 464 bits (240), Expect = e-135
Identities = 246/248 (99%)
Strand = Plus / Minus
Query: 1 ttgcttatccccatagggagcctttaaggcctaatataaatcttatttcaaattactccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ttgcttatccccatagggagcctttaaggcctaatataaatcttatttcaaattactccc 255
Query: 61 cagataagcattgtatatccagaatttcccagacttactggccaaggaagaacaatcatc 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 254 cagataagcattgtatatccagcatttcccagacttactggccaaggaagaacaatcatc 195
Query: 121 acaatcatcaccaccaccatcatcactactatctccatcatcaaaaccaccatcatcatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 acaatcatcaccaccaccatcatcactactatctccatcatcaaaaccaccatcatcatc 135
Query: 181 actactattatcaacatcaccaccaccaccactgtgtccatcaccatcatcatcaccacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 actactattatcaacatcaccaccaccaccactgtgtccatcaccatcatcatcaccacc 75
Query: 241 accaccac 248
|| |||||
Sbjct: 74 actaccac 67
Score = 99.3 bits (51), Expect = 6e-25
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 442 atcatcatcaccaccaccaccactgtgtccatcaccatcatcatcaccaccaccaccac 500
|||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 125 atcaacatcaccaccaccaccactgtgtccatcaccatcatcatcaccaccactaccac 67
Score = 99.3 bits (51), Expect = 6e-25
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 406 atcatcatcaccaccaccaccactgtgtccatcaccatcatcatcaccaccaccaccac 464
|||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 125 atcaacatcaccaccaccaccactgtgtccatcaccatcatcatcaccaccactaccac 67
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 3
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
