Query= MSMg01no079_l17.b1 MSMg01no079_l17.b1 CHROMAT_FILE:
MSMg01no079_l17.b1 PHD_FILE: MSMg01no079_l17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:26 2005
(639 letters)
>mm_chr11_55348433_55349471
Length = 1039
Score = 1152 bits (596), Expect = 0.0
Identities = 626/636 (98%), Gaps = 2/636 (0%)
Strand = Plus / Plus
Query: 5 gaattccaggcagaggtcaccctccctccagcagcccaccaggaccttggtggctgactc 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaggcagaggtgaccctccctccagcagcccaccaggaccttggtggctgactc 264
Query: 65 cgtgtccttcttcctctagatgtggctggtaggatggacgcaatcagcagagcttctgct 124
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cttgtccttcttcctctagatgtggctggtaggatggacgcaatcagcagagcttctgct 324
Query: 125 gcccctcagaggagagggtcccacgtcccttccgtacagtggtgacggttcctcgtccct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gcccctcagaggagagggtcccacgtcccttccgtacagtggtgacggttcctcgtccct 384
Query: 185 tcccgacagcctgtagaggcctgagcccagttgtctctgaaggtcaggatcagcccagcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcccgacagcctgtagaggcctgagcccagttgtctctgaaggtcaggatcagcccagcc 444
Query: 245 ttctcactttctgccctgccccatcttggatatttaaggctcctatctgaatgggagata 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttctcactttctgccctgccccatcttggatatttaaggctcctatctgaatgggagata 504
Query: 305 agacttctccctcaatgaggagctgaaggtgagagatatgtccatttagcattctgaagt 364
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 505 agacttctccctcaatgaggagctgaaggtgagagatacgtccatttagcattctgaagt 564
Query: 365 tctttaaaatcacaatacagccattcattatcatgtattgatgtgcagatggaaagtggt 424
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tctttaaaatcagaatacagccattcattatcatgtattgatgtgcagatggaaagtggt 624
Query: 425 ggccggtggccattctgatgttccagaagtcct-gggaccccaaactggaaagctgtggc 483
||||| ||||||||||||| ||||||||||| | ||||||||||||||||||||||||||
Sbjct: 625 ggccgctggccattctgattttccagaagtc-tcgggaccccaaactggaaagctgtggc 683
Query: 484 tcttttgatgctccagtgggcaggggacttacactagtaccccatcagtacctactctct 543
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tcttttgatgctccagcgggcaggggacttacactagtaccccatcagtacctactctct 743
Query: 544 gacaggaaccgtggacagttggccaagtttcctacattttcacatccccacttctctgat 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gacaggaaccgtggacagttggccaagtttcctacattttcacatccccacttctctgat 803
Query: 604 gtacacaacggggatcattaaacttagttcatgagt 639
|||||||||||||||||||||||| |||||||||||
Sbjct: 804 gtacacaacggggatcattaaactcagttcatgagt 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_l17.g1 MSMg01no079_l17.g1 CHROMAT_FILE:
MSMg01no079_l17.g1 PHD_FILE: MSMg01no079_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:26 2005
(245 letters)
>mm_chr11_55497775_55498419
Length = 645
Score = 420 bits (217), Expect = e-122
Identities = 238/245 (97%)
Strand = Plus / Minus
Query: 1 tatctagccctctgggactgtatttactacttgtcccagtaggtggacaggagcttcaga 60
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 445 tatctagccctctgagactgtatttactacttgtcccagtaagtggacaggagcttcaga 386
Query: 61 taggacattgaggtaatgctgagaagatgactcaaacttgcaaaacaagttaccagattt 120
||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 385 taggacattgaggaaatgccgagaagatgactcaaacttgcaaaacaggttaccagattt 326
Query: 121 tcatgacaaacttaacagagaaaatgggagaatatatttaaaaacaaagcaaatcaaaat 180
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 325 tcatgacaaacttaacagagaaaatgggagtatatatttaaaaacaaagcaaatcaaaac 266
Query: 181 aacccctgcctatgatgagatagatgccagttctcaaagcaaaggcaggacagacttgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aacccctgcctatgatgagatagatgccagttctcaaagcaaaggcaggacagacttgga 206
Query: 241 cacaa 245
|||||
Sbjct: 205 cacaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
