Query= MSMg01no079_p18.b1 MSMg01no079_p18.b1 CHROMAT_FILE:
MSMg01no079_p18.b1 PHD_FILE: MSMg01no079_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:45 2005
(372 letters)
>mm_chr11_4078638_4079409
Length = 772
Score = 658 bits (340), Expect = 0.0
Identities = 361/368 (98%)
Strand = Plus / Plus
Query: 3 gaattcagtggaattttacccaatatttaaggaatgggaatgaaacagtatgataatata 62
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattcagtggaattttaaggaatatttaaggaatgggaatgaaacagtatgataatata 262
Query: 63 cacttacaatctcagaactctagaggcaggaagtttgaggtcagcctatgttagccctga 122
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 263 cacttacaatctcagaactctagaggcaggaagtttgaggtcagcctaggctagccctga 322
Query: 123 tccctacctttaagcctgtctagaaaaataaagaagaaatgaagcctgtgtagtgtcaca 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cccctacctttaagcctgtctagaaaaataaagaagaaatgaagcctgtgtagtgtcaca 382
Query: 183 cctggtatcagcagtaaaggggtgagaggggcaggagtcgttgtttggatgagcaactga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cctggtatcagcagtaaaggggtgagaggggcaggagtcgttgtttggatgagcaactga 442
Query: 243 tagcacagcatagttcctaattggcttggggctttccagacataatgagcactgcatttt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tagcacagcatagttcctaattggcttggggctttccagacataatgagcactgcatttt 502
Query: 303 gcagggtccagtatccatcaaagtgcatgtacccaacatgcaggataagacggaatggaa 362
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 503 gcagggtccagtatccatcaaagtgcaggtacccaacatgcaggataagacggaatggaa 562
Query: 363 gctgaatg 370
||||||||
Sbjct: 563 gctgaatg 570
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_p18.g1 MSMg01no079_p18.g1 CHROMAT_FILE:
MSMg01no079_p18.g1 PHD_FILE: MSMg01no079_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:45 2005
(317 letters)
>mm_chr11_4251590_4252306
Length = 717
Score = 561 bits (290), Expect = e-164
Identities = 314/332 (94%), Gaps = 17/332 (5%)
Strand = Plus / Minus
Query: 1 atggtgtgattgggaaacgtaatgtaattgagattgtttggataaatacagcagattgtt 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 702 atggtgtgattgggaaacgtaatgtaattgagattgtttggataaataaagcagattgtt 643
Query: 61 ttccttttgctctcacaactcaatcagcataaaagaccttttattcttccctctgtgtgt 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 642 ttccttttgctctcacaactcaatcagcataaaaga-cttttattcttccctctgtgtgt 584
Query: 121 gtacattatgtatgtatgtg----------------tgtatgtatgtatgtatgtatgca 164
|||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 583 gtacattatgtatgtatgtgtgtatgtatgtatgtatgtatgtatgtatgtatgtatgca 524
Query: 165 tatgtgtgttcatttgtgtgccagtatacatgagcatgtatgtgcacacagcatgcagaa 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tatgtgtgttcatttgtgtgccagtatacatgagcatgtatgtgcacacagcatgcagaa 464
Query: 225 agtcggtgtctgctattccctcagttactctctctactttgtttttgagtcagggtttct 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 agtcggtgtctgctattccctcagttactctctctactttgtttttgagtcagggtttct 404
Query: 285 agaacatggacctcaccaattcagccagccta 316
||||||||||||||||||||||||||||||||
Sbjct: 403 agaacatggacctcaccaattcagccagccta 372
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
