Query= MSMg01no081_j01.b1 MSMg01no081_j01.b1 CHROMAT_FILE:
MSMg01no081_j01.b1 PHD_FILE: MSMg01no081_j01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:48 2005
(430 letters)
>mm_chr11_70579192_70580021
Length = 830
Score = 746 bits (386), Expect = 0.0
Identities = 416/426 (97%), Gaps = 2/426 (0%)
Strand = Plus / Minus
Query: 6 aattccattactcatctcgg-acaaagcccacctcctccggaagtcctcactaacatctg 64
||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||
Sbjct: 630 aattccattactcatct-ggcacaaggcccacctcctccggaagtcctcactaacatctg 572
Query: 65 caggaaggagtccttggtcctctgaagccggttttcccctcgcccccttctcacctttcc 124
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 571 caggaaggagtccttggtcctctgaagccagttttcccctcgcccccttctcacctttcc 512
Query: 125 ttaactacagtttccatgttacttcctgtttgttgctcttttcgagaccttaagaatgaa 184
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 511 ttaactacagtttccatgttacttcctgtttgttgctcttttcgaggccttcagaatgaa 452
Query: 185 tacttcctacagctcacaatgctctcctaatcgtggccgtttcccttccccacatcctac 244
|||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 451 tacttcctacggctcacaaagctctcctaatcgtggccgtttcctttccccacatcctac 392
Query: 245 ctcacagtcttcaacaacaaccggcagctgcaggtgtgctcagtgtcctgcaggccaaac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ctcacagtcttcaacaacaaccggcagctgcaggtgtgctcagtgtcctgcaggccaaac 332
Query: 305 actgtccattctttaaagtttctcggccttcggaaacaaatcattctcacttcctggact 364
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 331 actgtccattctttaaagtttctctgccttcggaaacaaatcattctcacttcctggact 272
Query: 365 tagcaaacatcttcgcgatgcagctgatatggacagtcccctccatcctctttctgatct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tagcaaacatcttcgcgatgcagctgatatggacagtcccctccatcctctttctgatct 212
Query: 425 gcaggc 430
||||||
Sbjct: 211 gcaggc 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no081_j01.g1 MSMg01no081_j01.g1 CHROMAT_FILE:
MSMg01no081_j01.g1 PHD_FILE: MSMg01no081_j01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:49 2005
(332 letters)
>mm_chr11_70502973_70503704
Length = 732
Score = 642 bits (332), Expect = 0.0
Identities = 332/332 (100%)
Strand = Plus / Plus
Query: 1 tcttaaagctcttaactatgctgcctctctctaatccctgcttggcttgcagaggcccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttaaagctcttaactatgctgcctctctctaatccctgcttggcttgcagaggcccat 260
Query: 61 gccacgcctccttactcattgatgattccctggcgccttctcaggtcctccagatgataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccacgcctccttactcattgatgattccctggcgccttctcaggtcctccagatgataa 320
Query: 121 gtaactgctctaactcgggctggaatgcttccaggtcccttctgcattctttccaaatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtaactgctctaactcgggctggaatgcttccaggtcccttctgcattctttccaaatgc 380
Query: 181 agcttctttctctttcttctccaaagcttctcaggaggagggagcccctcaagagggtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcttctttctctttcttctccaaagcttctcaggaggagggagcccctcaagagggtgc 440
Query: 241 aggctaggccgggagcaatcagtggccctctgtgtcaagaaggaagaatagttgctaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggctaggccgggagcaatcagtggccctctgtgtcaagaaggaagaatagttgctaaat 500
Query: 301 atagatagatgtcagtttcagggaaacttggg 332
||||||||||||||||||||||||||||||||
Sbjct: 501 atagatagatgtcagtttcagggaaacttggg 532
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
