Query= MSMg01no084_n05.b1 MSMg01no084_n05.b1 CHROMAT_FILE:
MSMg01no084_n05.b1 PHD_FILE: MSMg01no084_n05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:57 2005
(193 letters)
>mm_chr11_63760584_63761176
Length = 593
Score = 342 bits (177), Expect = 6e-99
Identities = 189/193 (97%)
Strand = Plus / Plus
Query: 1 cacaagtgcaggcccaggagctcaagtggaagaatacctgggcatgagtcttgaggtcaa 60
|||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||
Sbjct: 201 cacaagtgcaggcccaggagctcaagtgaaagaagacctgagcatgagtcttgaggtcaa 260
Query: 61 tgcctgaaacacgtatcggtgctgaaatgggtcaccgtggccaagaggacactaaatact 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcctgaaacacatatcggtgctgaaatgggtcaccgtggccaagaggacactaaatact 320
Query: 121 cccattgatcaatcccatgtggcatgtcacctgtggcacctggttagaatcagctccatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccattgatcaatcccatgtggcatgtcacctgtggcacctggttagaatcagctccatc 380
Query: 181 caagtcctgcaag 193
|||||||||||||
Sbjct: 381 caagtcctgcaag 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 593
Length adjustment: 8
Effective length of query: 185
Effective length of database: 585
Effective search space: 108225
Effective search space used: 108225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no084_n05.g1 MSMg01no084_n05.g1 CHROMAT_FILE:
MSMg01no084_n05.g1 PHD_FILE: MSMg01no084_n05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:57 2005
(283 letters)
>mm_chr11_63833604_63834281
Length = 678
Score = 478 bits (247), Expect = e-139
Identities = 272/283 (96%), Gaps = 5/283 (1%)
Strand = Plus / Minus
Query: 1 ttaattatagatatagacgtaaaaatctgaatggattaaagaattatcttatctgcattt 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 478 ttaattatagatatagacgtaaaaatctgaatggattaaagaa-----ttatctgcattt 424
Query: 61 taatgatgcaattttgagcactttgattttcagctgtgatgctgtttatttttcttatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 taatgatgcaattttgagcactttgattttcagctgtgatgctgtttatttttcttatat 364
Query: 121 ttatgaaatttaaacatttgctttgaatgttgcacatgatgtctgtttgataaaagactc 180
|||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||
Sbjct: 363 ttatgaaatttaaacatttgctttgaatgttgtagatgaggtctgtttgataaaagactc 304
Query: 181 cccctgtagtcattacttttgaacactatcagatatccattttatttcattattctgtaa 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 303 cccctgtagtcattacttttgaacactatcagatatccattttatttcattattctgtga 244
Query: 241 ctgtacttcctttcttattattcttacatatttctcgaaagga 283
||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 243 ctgtacttcctgtcttattattcttacatatttctggaaagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 678
Length adjustment: 9
Effective length of query: 274
Effective length of database: 669
Effective search space: 183306
Effective search space used: 183306
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
