Query= MSMg01no085_j13.b1 MSMg01no085_j13.b1 CHROMAT_FILE:
MSMg01no085_j13.b1 PHD_FILE: MSMg01no085_j13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:36:34 2005
(156 letters)
>mm_chr11_106260775_106261328
Length = 554
Score = 267 bits (138), Expect = 2e-76
Identities = 145/148 (97%), Gaps = 2/148 (1%)
Strand = Plus / Minus
Query: 9 aggtggttctgtgagagacctcctccgagccatgagaaacaaggtaaagacttatgaggg 68
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 aggtggctctgtgagagacctcctccgagccatgagaaacaaggtaaagacttatgaggg 295
Query: 69 cttggggaggtggccacagcagagattgatggcttatgttcatttctgtgtatttttttt 128
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 294 cttggggaggtggccacagcagagattgatggcttatgttcatttctgtgta--tttttt 237
Query: 129 ttttcttacaatggatcctatctgggca 156
||||||||||||||||||||||||||||
Sbjct: 236 ttttcttacaatggatcctatctgggca 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 156
Length of database: 554
Length adjustment: 8
Effective length of query: 148
Effective length of database: 546
Effective search space: 80808
Effective search space used: 80808
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no085_j13.g1 MSMg01no085_j13.g1 CHROMAT_FILE:
MSMg01no085_j13.g1 PHD_FILE: MSMg01no085_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:36:34 2005
(211 letters)
>mm_chr11_106101120_106101730
Length = 611
Score = 381 bits (197), Expect = e-110
Identities = 200/201 (99%)
Strand = Plus / Plus
Query: 11 gcaacttttcgaaagaagattgaaaagttggccagagacatcttgattgaccctattcga 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gcaacttttcgaaagaagattgaaaagttggccagagacatcttgattgaccctattcga 270
Query: 71 gtggtgcagggagacattggagaggtaggtaatcctgcttaaggcagggtggatcctggg 130
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 271 gtggtgcagggagacattggagaggtaggtaatcctgcttaaggcagggtgggtcctggg 330
Query: 131 atttatttctcatgaggctgtggaatttaattcttaagtaatgattgttctgttttagat 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 atttatttctcatgaggctgtggaatttaattcttaagtaatgattgttctgttttagat 390
Query: 191 ttaattttttttctttttttt 211
|||||||||||||||||||||
Sbjct: 391 ttaattttttttctttttttt 411
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 211
Length of database: 611
Length adjustment: 9
Effective length of query: 202
Effective length of database: 602
Effective search space: 121604
Effective search space used: 121604
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
