Query= MSMg01no087_h23.b1 MSMg01no087_h23.b1 CHROMAT_FILE:
MSMg01no087_h23.b1 PHD_FILE: MSMg01no087_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:39 2005
(249 letters)
>mm_chr11_47072826_47073474
Length = 649
Score = 470 bits (243), Expect = e-137
Identities = 246/247 (99%)
Strand = Plus / Plus
Query: 1 ccaccggccacccgccctgctgaaaattggctacctaaaagcacacaaggaaaagagcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccaccggccacccgccctgctgaaaattggctacctaaaagcacacaaggaaaagagcca 260
Query: 61 gagtccaccttgcagcctagtagttcctggagctgcagtggcggcctgtaaatgccacgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagtccaccttgcagcctagtagttcctggagctgcagtggcggcctgtaaatgccacgg 320
Query: 121 ctccgagcaggagcttatggtgaaatggctgcaaaggcagtggggatttgtattatacaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 ctccgagcaggagcttatggtgaaatggctgcaaaggcagtggggatttgtattgtacaa 380
Query: 181 gcctcctttgagagaccaagtcaaagtttgcctgattgttacaataacacctttatagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcctcctttgagagaccaagtcaaagtttgcctgattgttacaataacacctttatagtt 440
Query: 241 ttccaaa 247
|||||||
Sbjct: 441 ttccaaa 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no087_h23.g1 MSMg01no087_h23.g1 CHROMAT_FILE:
MSMg01no087_h23.g1 PHD_FILE: MSMg01no087_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:39 2005
(178 letters)
>mm_chr11_47181201_47181781
Length = 581
Score = 319 bits (165), Expect = 6e-92
Identities = 176/181 (97%), Gaps = 3/181 (1%)
Strand = Plus / Minus
Query: 1 tttataaaaccaaatctccatcagttcttgagagtctttaaaatcctcgctcaaatacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttataaaaccaaatctccatcagttcttgagagtctttaaaatcctcgctcaaatacag 322
Query: 61 catt---cacaaggccacactgtcccttaatcattcctacaaggcattcatcccctgtca 117
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 cattcaccacaaggccacactgtcccttaatcgttcctacaaggcattcatcccctgtca 262
Query: 118 taaataaaataaacttgtgtttttatgttggatatcagtctcctctatcactacttctta 177
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaataaaatatacttgtgtttttatgttggatatcagtctcctctatcactacttctta 202
Query: 178 c 178
|
Sbjct: 201 c 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 178
Length of database: 581
Length adjustment: 8
Effective length of query: 170
Effective length of database: 573
Effective search space: 97410
Effective search space used: 97410
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
