Query= MSMg01no087_o19.b1 MSMg01no087_o19.b1 CHROMAT_FILE:
MSMg01no087_o19.b1 PHD_FILE: MSMg01no087_o19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:13 2005
(419 letters)
>mm_chr11_50134026_50134846
Length = 821
Score = 791 bits (409), Expect = 0.0
Identities = 418/421 (99%), Gaps = 2/421 (0%)
Strand = Plus / Plus
Query: 1 gtagtataatcctgtttc-aaactcaaacaagggggagggg-aaaaaaaaactcaaacaa 58
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 gtagtataatcctgtttcaaaactcaaacaagggggaggggaaaaaaaaaactcaaacaa 260
Query: 59 aaagaaacctcaactctaatttctttcatttatgaaaatcacagggatagtaagatgatc 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaagaaacctcaactctaatttctttcatttatgaaaatcacagggatagtaagatgatc 320
Query: 119 taatattcttagttattctaatataaatactaagtaatttttgaaatagcatggaaactt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taatattcttagttattctaatataaatactaagtaatttttgaaatagcatggaaactt 380
Query: 179 taaaatgtgatttctatgtaagctatacattccttccattcatttcagcatactattggt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaaatgtgatttctatgtaagctatacattccttccattcatttcagcatactattggt 440
Query: 239 gtgagtctatgtgaaggcttgtgtgtacaaaggacagacctgatgtcttcctccatctcc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgagtctatgtgaaggcttgtgtgtacaaaggacagacctgatgtcttcctccatctcc 500
Query: 299 cttcaccttattctttgacacaggttctgagagaacctaaagcctatgagctttagcatc 358
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 501 cttcaccttattctttgacacagggtctgagagaacctaaagcctatgagctttagcatc 560
Query: 359 ccattgtctccagtccccagcgctgaatgctgacaatataaactcaggtcttaatgcttg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccattgtctccagtccccagcgctgaatgctgacaatataaactcaggtcttaatgcttg 620
Query: 419 c 419
|
Sbjct: 621 c 621
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 821
Length adjustment: 9
Effective length of query: 410
Effective length of database: 812
Effective search space: 332920
Effective search space used: 332920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no087_o19.g1 MSMg01no087_o19.g1 CHROMAT_FILE:
MSMg01no087_o19.g1 PHD_FILE: MSMg01no087_o19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:13 2005
(126 letters)
>mm_chr11_50333270_50333796
Length = 527
Score = 215 bits (111), Expect = 9e-61
Identities = 123/127 (96%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 1 ccacagttgctgcatgtgccaaagacccctagactggacctgtgggtctgaaagttcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ccacagttgctgcatgtgccaaagacccctagactggacctgtgggtctgaaagttcttc 268
Query: 61 tcacagagataacagcagagggtcacctagttgaataacagatcaggaggcagcttgctt 120
||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tcatggagataagagcagagggtcacctagttgaataacagatcaggaggcagcttgctt 208
Query: 121 gg-aaaa 126
|| ||||
Sbjct: 207 gggaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 126
Length of database: 527
Length adjustment: 8
Effective length of query: 118
Effective length of database: 519
Effective search space: 61242
Effective search space used: 61242
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
