TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTCTGCAGTTCTGTTGGAACTCTACCCTGTTGACAAGAGTCTGCGGAAGC
ATAAATGAAGACGATATCATCAAGGACACAAAACTCCTAACTACAATTAA
GACATTGCCGTCTTGAAAACTGTTAAGGGAGGAGATGAAATCTTCCTAGC
CTCTAAAATGACAACTGTGTGAAATGGTGAAAAACATTTTTCATAACTTT
CTAAAGTTTTAATTTCATCTGTATGAGTGTTTGGCTGATGGTAGCACCTC
TGCCCCTGGCCTGATATGAACAGAGTTAAGAAGAAAGTCTCCGGTCCTTT
AGAGATAGAATTACAGAAGGATGTAGGTGCTGGGTATCAAATTTGGATCC
ACCCAGTGCTCTTACCAGAAAGAGCTGTCTTTCTAATACCCGGTGGTACA
CGTGTTAATTAGCTCAATTCTTCATTTCCAGGATGTATTTTCAGAACATG
TACAGAATAATTACATGCAATTTTATCTGTCAATTAAAATAAATGAATAA
AAAGGAAGAGAAACAAAATGCCAAGAGCTGTTACCCATCCCATTAGGGTG
AACTACATTTCTGTAGAGCATCACCCTGTCTGAGGCATCCAGTTCTGCAG
ACCAGACTCAACGTTTTTGTCCATTTGAGTCACACCGAGCCTGTTTGAGT
CTGGAAT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTAAAATCATGGATAGGTCTTTG
GGTTGCAACAAATTTATGTAAAAGGAAAAATGTTATGACTTCTCATGTTA
AAAATAAGATACGGAAGGCTGTCATTGTCAAATTTCTACAACCAGTTAAT
AACAGGATAATAAGAAGCAGAAATTGTTCCCAGATTTTCAGCATGAGACA
CAGTTTTGGTACCAGTGGTGGGCAATTTGTTTCAAAACTAATCAATGTTT
TCCTCTGATTTTTTACAGTGATTTATGGCTGGAGACAACTCAGTGGTAGA
CCACTTCAAGAGGCCATGTTCATTCCCGATGCCCTATGTAAAACAAACAA
ACAACAACAACAACATGTATAGGTGCTGACGGCACAGAGTCTATGAAGTG
CTTTCCTTGAAAGCACGAGGACTTGGGTTTGATCCCCAGAAACCATGTAA
GAAAAGCCAAGTGAGAAGGAGCATGCTTGTAATCCCAGCAGCAGCAGCAA
GACAAAGACAGGGGAATTCTTTTTGAGCCTCATTTCCAGGTAGCTTACCC
TGTCTCCTAAAACAGGTAGATACCTGAGAAATAAAACCCAAAATTATCCT
CTGCCTACAAGAGCACCCACATGATGCATGGACCCACAGAGATACACACC
ATTATATATATATT

Query= MSMg01no088_l12.b1 MSMg01no088_l12.b1 CHROMAT_FILE:
MSMg01no088_l12.b1 PHD_FILE: MSMg01no088_l12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:17 2005
         (607 letters)



>mm_chr11_110797459_110798465
          Length = 1007

 Score =  741 bits (383), Expect = 0.0
 Identities = 407/415 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctctgcagttctgttggaactctaccctgttgacaagagtctgcggaagcataaa 64
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 415 gaattctctgcagttctgttggaactctaccctgttgacaagagtctggggaagcataaa 356

                                                                       
Query: 65  tgaagacgatatcatcaaggacacaaaactcctaactacaattaagacattgccgtcttg 124
            ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 cgaagacgatatcaccaaggacacaaaactcctaactacaattaagacattgccgtcttg 296

                                                                       
Query: 125 aaaactgttaagggaggagatgaaatcttcctagcctctaaaatgacaactgtgtgaaat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aaaactgttaagggaggagatgaaatcttcctagcctctaaaatgacaactgtgtgaaat 236

                                                                       
Query: 185 ggtgaaaaacatttttcataactttctaaagttttaatttcatctgtatgagtgtttggc 244
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 agtgaaaaacatttttcataactttctaaagttttaatttcatctgtatgagtgtttggc 176

                                                                       
Query: 245 tgatggtagcacctctgcccctggcctgatatgaacagagttaagaagaaagtctccggt 304
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 175 tgatggtagcacctctgcccctggcctggtatgaacagagttaagaagaaagtctccggt 116

                                                                       
Query: 305 cctttagagatagaattacagaaggatgtaggtgctgggtatcaaatttggatccaccca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 cctttagagatagaattacagaaggatgtaggtgctgggtatcaaatttggatccaccca 56

                                                                  
Query: 365 gtgctcttaccagaaagagctgtctttctaatacccggtggtacacgtgttaatt 419
           |||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 55  gtgctcttgccagaaagagctgcctttctaatacccggtggtacacttgttaatt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space:   595209
Effective search space used:   595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no088_l12.g1 MSMg01no088_l12.g1 CHROMAT_FILE:
MSMg01no088_l12.g1 PHD_FILE: MSMg01no088_l12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:17 2005
         (603 letters)



>mm_chr11_110659795_110660797
          Length = 1003

 Score = 1158 bits (599), Expect = 0.0
 Identities = 602/603 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttaaaatcatggataggtctttgggttgcaacaaatttatgtaaaaggaaaaatgttat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaaaatcatggataggtctttgggttgcaacaaatttatgtaaaaggaaaaatgttat 260

                                                                       
Query: 61  gacttctcatgttaaaaataagatacggaaggctgtcattgtcaaatttctacaaccagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacttctcatgttaaaaataagatacggaaggctgtcattgtcaaatttctacaaccagt 320

                                                                       
Query: 121 taataacaggataataagaagcagaaattgttcccagattttcagcatgagacacagttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taataacaggataataagaagcagaaattgttcccagattttcagcatgagacacagttt 380

                                                                       
Query: 181 tggtaccagtggtgggcaatttgtttcaaaactaatcaatgttttcctctgattttttac 240
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggtaccagtggtgggcgatttgtttcaaaactaatcaatgttttcctctgattttttac 440

                                                                       
Query: 241 agtgatttatggctggagacaactcagtggtagaccacttcaagaggccatgttcattcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtgatttatggctggagacaactcagtggtagaccacttcaagaggccatgttcattcc 500

                                                                       
Query: 301 cgatgccctatgtaaaacaaacaaacaacaacaacaacatgtataggtgctgacggcaca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cgatgccctatgtaaaacaaacaaacaacaacaacaacatgtataggtgctgacggcaca 560

                                                                       
Query: 361 gagtctatgaagtgctttccttgaaagcacgaggacttgggtttgatccccagaaaccat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gagtctatgaagtgctttccttgaaagcacgaggacttgggtttgatccccagaaaccat 620

                                                                       
Query: 421 gtaagaaaagccaagtgagaaggagcatgcttgtaatcccagcagcagcagcaagacaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtaagaaaagccaagtgagaaggagcatgcttgtaatcccagcagcagcagcaagacaaa 680

                                                                       
Query: 481 gacaggggaattctttttgagcctcatttccaggtagcttaccctgtctcctaaaacagg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gacaggggaattctttttgagcctcatttccaggtagcttaccctgtctcctaaaacagg 740

                                                                       
Query: 541 tagatacctgagaaataaaacccaaaattatcctctgcctacaagagcacccacatgatg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tagatacctgagaaataaaacccaaaattatcctctgcctacaagagcacccacatgatg 800

              
Query: 601 cat 603
           |||
Sbjct: 801 cat 803


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space:   588849
Effective search space used:   588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)