Query= MSMg01no091_h15.b1 MSMg01no091_h15.b1 CHROMAT_FILE:
MSMg01no091_h15.b1 PHD_FILE: MSMg01no091_h15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:00 2005
(507 letters)
>mm_chr11_29075579_29076490
Length = 912
Score = 922 bits (477), Expect = 0.0
Identities = 502/513 (97%), Gaps = 7/513 (1%)
Strand = Plus / Minus
Query: 1 atagacacatataaaaattttccaag-----aaaaaaaaaaactcaccagttgaatacta 55
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 525 atagacacatataaaaattttccaagaaaaaaaaaaaaaaaactcaccagttgaatacta 466
Query: 56 aaatatattgaagaactaagaatgtattgcatgcatcaac-atgttacattaatattttt 114
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 465 aaatatattgaagaactaagaatgtattgcatgcatcaacaat-ttacattaatattttt 407
Query: 115 accattaataagctttacaaaagatgtaattttatctcttctgtgaagtgtttatagaat 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 accattaataagctttacaaaagatgtaattttatctcttctgtgaagtgtttatagaat 347
Query: 175 caaaattctcatagactttgaaaaaaagatagacctgatgctataaatacaaacctaaaa 234
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ccaaattctcatagactttgaaaaaaagatagacctgatgctataaatacaaacctaaaa 287
Query: 235 tgtctttcctttccaaagcctgtcatagtgactttatttacaaaacacatcacactacac 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 tgtctttcctttccaaagcctgtcatagtgactttatttacaaaacacatcacactacac 227
Query: 295 ccacacaaaaatcaaaggactcacagttatatatattaaaattataatacagtatttaaa 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 226 ccacacaaaaatcaaaggactcacagttatatatattaaaattataatacagtattttaa 167
Query: 355 aaaactccctatgttaacacaaataaatcttcaaagaagtgtgaaaacacaaattttaga 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 aaaactccctatgttaacacaaataaatcttcaaagaagtgtgaaaacacaaattttaga 107
Query: 415 atacatgtaaagtatgttatcaatagtatattgtaaaaagtttaaaaacacaaagactac 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 atacatgtaaagtatgttatcaatagtatattgtaaaaagtttaaaaacacaaagactac 47
Query: 475 atattatttatgactatatacatatgccagaag 507
|||| |||||||||||||||||||||| |||||
Sbjct: 46 atatcatttatgactatatacatatgcaagaag 14
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 912
Length adjustment: 10
Effective length of query: 497
Effective length of database: 902
Effective search space: 448294
Effective search space used: 448294
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no091_h15.g1 MSMg01no091_h15.g1 CHROMAT_FILE:
MSMg01no091_h15.g1 PHD_FILE: MSMg01no091_h15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:00 2005
(522 letters)
>mm_chr11_28940288_28941209
Length = 922
Score = 978 bits (506), Expect = 0.0
Identities = 518/522 (99%)
Strand = Plus / Plus
Query: 1 aacttccttgttttatttaaattctaaataattaaaaattaaattctatatataacctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacttccttgttttatttaaattctaaataattaaaaattaaattctatatataacctgg 260
Query: 61 agccctaataagtgcaaagcattgtggggtcatactatcccacaaaagcacatgaagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agccctaataagtgcaaagcattgtggggtcatactatcccacaaaagcacatgaagaac 320
Query: 121 ttgtcagtccgcattcttctcttaagagaagaaaatagtgaatgccatgagcagctatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtcagtccgcattcttctcttaagagaagaaaatagtgaatgccatgagcagctatac 380
Query: 181 taaccagtgaaagccagtggagaaagactttgttctggttatctatagctgtaggaaata 240
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 381 taaccagtgaaagccagtggagaaagactttgtcctggttatctatagctgtaggaaaca 440
Query: 241 gagctcctggaattttgttccatccatttcagaagcttatccaattttagccttaaccca 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 441 gagctcctggaattttgttccatccatttcagaagcttatccaattctagccttacccca 500
Query: 301 gaattcaaacttcttgtaacttctgaccctggtaggattggagaaaatctagaaccttcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaattcaaacttcttgtaacttctgaccctggtaggattggagaaaatctagaaccttcc 560
Query: 361 aagtgttttcctcttacacatattcattcagaagacaagttttgtgctctaaacacagga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagtgttttcctcttacacatattcattcagaagacaagttttgtgctctaaacacagga 620
Query: 421 agctttatcagtaatatacctgcttttaaaaattatttagtcctcctactttccataagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agctttatcagtaatatacctgcttttaaaaattatttagtcctcctactttccataagc 680
Query: 481 ttttctttaccctcctgcaattagtggagctataggaaccct 522
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttttctttaccctcctgcaattagtggagctataggaaccct 722
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
