Query= MSMg01no093_e02.b1 MSMg01no093_e02.b1 CHROMAT_FILE:
MSMg01no093_e02.b1 PHD_FILE: MSMg01no093_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:47:38 2005
(229 letters)
>mm_chr11_25494590_25495218
Length = 629
Score = 408 bits (211), Expect = e-118
Identities = 223/227 (98%)
Strand = Plus / Plus
Query: 1 gactcttgccgaaggtggaaaaagtccacgctagtgttcaagagttttaaacagtacact 60
||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 gactcttgcagaaggtggaaaaagtccacgctagtgtttaagagttttaaacagtacact 260
Query: 61 cactacatagggaagaaggcataaaattactcattgagctaatctactcaatacagctta 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cactagatagggaagaaggcataaaattactcattgagctaatctactcaatacagctta 320
Query: 121 catgtagcctctgccagatattgcaccaggcattgtattcaccagggagatgatgcagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catgtagcctctgccagatattgcaccaggcattgtattcaccagggagatgatgcagtt 380
Query: 181 tgagattcaatcgagacagaattaccttttgtgattagctaggctga 227
|||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 tgagattcaatcgagacagaattagcttttgtgattagctaggctga 427
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no093_e02.g1 MSMg01no093_e02.g1 CHROMAT_FILE:
MSMg01no093_e02.g1 PHD_FILE: MSMg01no093_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:47:38 2005
(364 letters)
>mm_chr11_25609375_25610137
Length = 763
Score = 673 bits (348), Expect = 0.0
Identities = 360/364 (98%), Gaps = 1/364 (0%)
Strand = Plus / Minus
Query: 1 tagttctcctttcacaggcagccatctggctatgtctgctaggcgactgaaccataattg 60
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 563 tagttctcctttcacaggcagccatctggagatgtctgctaggcgactgaaccataattg 504
Query: 61 ggaggcagacccaagtcacaaatttcaatttttaaaaggatttgctaagatttttaggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ggaggcagacccaagtcacaaatttcaatttttaaaaggatttgctaagatttttaggta 444
Query: 121 agatccatagagttcagggtatagtatacaaacagggcttttgctgggtgctgaggtctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 agatccatagagttcagggtatagtatacaaacagggcttttgctgggtgctgaggtctg 384
Query: 181 aagcaaaaggggactaattgttgtagcgagttgatgacactgtgatggttaacctttaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aagcaaaaggggactaattgttgtagcgagttgatgacactgtgatggttaacctttaat 324
Query: 241 gaccatgtcctaggtgccagcaatctaccacatgtgtcagcctgctccatcctcagaagc 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gaccatgtcctaggtgccag-aatctaccacatgtgtcagcctgctccatcctcagaagc 265
Query: 301 tcttctaatggagccattgttatcatttccagtttaaaacacggaaatcaagtttaggaa 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 264 tcttctaatggagccattgttatcatttccagtttaaaacaaggaaatcaagtttaggaa 205
Query: 361 gttt 364
||||
Sbjct: 204 gttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 763
Length adjustment: 9
Effective length of query: 355
Effective length of database: 754
Effective search space: 267670
Effective search space used: 267670
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
