NNCCCCNNNNNCCNNNNNTTTTTTCCCTTTTCCNNNTCCNTNNTTTNCCC
CNTTTTTTTNNTACTTTTTTTTTTCTCTTCTTCCGCCCTCCCACACTTTC
CANACCGCCGCCTATTTTTTTTTTTTAAACACCTACCACCACTTACACTT
GCTCTTACCACTGTCTATTTGCCAGCTCGCTCGTCTTCGCGCACCCGTAC
TTCGTGTTACTTTGCTTACTGGCCCGCCGCAGCTCTCCGTACCGCCTATT
GTGAGTCGTTGTTGCATGTCTTTCAGAATAGTAAGTACTTACGCGCCCTA
TAGCACACCAAGGTTAGCCAAGTATATATAATAAGCGAAGGTAACTACGG
ATGGAGATATACGCGGATGTAAAACAGCCACGACAGAGATGTTGAGGTTA
CAACGACAATAATAACAGTATGAACAGAATGTATCCATACCTCTACATCT
ATACGCGTAATTACAGACGATTAAAGAATGAGAAAGATGAGCGTCAGAGA
TGATCACAAGAAGATATAAGACAGATCGTAGTAAACACGTAACTGCAGGA
CGAGCTAAGATGCGTAGATATTCAGCATCATATCAACACAGCTGAATTAT
GGCAGGAGAGAAATATAGTGAGCATAACAGAACAGAGATCGATAATATAT
TCAGATAGCTGCCGTGATAGCAATCATTAGAGATGTAATGAGAATTACCA
ATGCTACATGCAGAGCTGACAATATACTGTTAGCAGGCACACATCGACCA
CGAAATATGTAAGACGAAAAGAGAGATATTAGACGACATAAAATACACGA
ACTTACTCACGCCCTTATGCCGGTAGTCACACGAAGCAGTATAGAATGGC
GGGTTGAATGAGAAATGGGAAATTAGCGGGGCGCAAGGCTGGTAGAGGAT
ACGCGTATAGAATATAACACATGATAATGTTATGTAG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAACTTCCTTGTTTTATTTAAAT
TCTAAATAATTAAAAATTAAATTCTATATATAACCTGGAGCCCTAATAAG
TGCAAAGCATTGTGGGGTCATACTATCCCACAAAAGCACATGAAGAACTT
GTCAGTCCGCATTCTTCTCTTAAGAGAAGAAAATAGTGAATGCCATGAGC
AGCTATACTAACCAGTGAAAGCCAGTGGAGAAAGACTTTGTTCTGGTTAT
CTATAGCTGTAGGAAATAGAGCTCCTGGAATTTTGTTCCATCCATTTCAG
AAGCTTATCCAATTTTAGCCTTAACCCAGAATTCAAACTTCTTGTAACTT
CTGACCCTGGTAGGATTGGAGAAAATCTAGAACCTTCCAAGTGTTTTCCT
CTTACACATATTCATTCAGAAGACAAGTTTTGTGCTCTAAACACAGGAAG
CTTTATCAGTAATATACCTGCTTTTAAAAATTATTTAGTCCTCCTACTTT
CCATAAGCTTTTCTTTACCCTCCTGCAATTAGTGGAGCTATAGGAACCCT
GGATTAGCTAACTTGTGCCATCTAAAGGCAGTAGTGAGAACACTCCAAAA
TTGTTTAAATACTCATATNAAACTTTAATAAACTTAGTTCTACATACAGC
TAAAATATA

Query= MSMg01no094_n24.g1 MSMg01no094_n24.g1 CHROMAT_FILE:
MSMg01no094_n24.g1 PHD_FILE: MSMg01no094_n24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:42 2005
         (563 letters)



>mm_chr11_28940288_28941250
          Length = 963

 Score = 1058 bits (547), Expect = 0.0
 Identities = 559/563 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aacttccttgttttatttaaattctaaataattaaaaattaaattctatatataacctgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacttccttgttttatttaaattctaaataattaaaaattaaattctatatataacctgg 260

                                                                       
Query: 61  agccctaataagtgcaaagcattgtggggtcatactatcccacaaaagcacatgaagaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agccctaataagtgcaaagcattgtggggtcatactatcccacaaaagcacatgaagaac 320

                                                                       
Query: 121 ttgtcagtccgcattcttctcttaagagaagaaaatagtgaatgccatgagcagctatac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtcagtccgcattcttctcttaagagaagaaaatagtgaatgccatgagcagctatac 380

                                                                       
Query: 181 taaccagtgaaagccagtggagaaagactttgttctggttatctatagctgtaggaaata 240
           ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 381 taaccagtgaaagccagtggagaaagactttgtcctggttatctatagctgtaggaaaca 440

                                                                       
Query: 241 gagctcctggaattttgttccatccatttcagaagcttatccaattttagccttaaccca 300
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 441 gagctcctggaattttgttccatccatttcagaagcttatccaattctagccttacccca 500

                                                                       
Query: 301 gaattcaaacttcttgtaacttctgaccctggtaggattggagaaaatctagaaccttcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaattcaaacttcttgtaacttctgaccctggtaggattggagaaaatctagaaccttcc 560

                                                                       
Query: 361 aagtgttttcctcttacacatattcattcagaagacaagttttgtgctctaaacacagga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagtgttttcctcttacacatattcattcagaagacaagttttgtgctctaaacacagga 620

                                                                       
Query: 421 agctttatcagtaatatacctgcttttaaaaattatttagtcctcctactttccataagc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agctttatcagtaatatacctgcttttaaaaattatttagtcctcctactttccataagc 680

                                                                       
Query: 481 ttttctttaccctcctgcaattagtggagctataggaaccctggattagctaacttgtgc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttttctttaccctcctgcaattagtggagctataggaaccctggattagctaacttgtgc 740

                                  
Query: 541 catctaaaggcagtagtgagaac 563
           |||||||||||||||||||||||
Sbjct: 741 catctaaaggcagtagtgagaac 763


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space:   527009
Effective search space used:   527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)