Query= MSMg01no095_m09.b1 MSMg01no095_m09.b1 CHROMAT_FILE:
MSMg01no095_m09.b1 PHD_FILE: MSMg01no095_m09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:54 2005
(311 letters)
>mm_chr11_112559996_112560706
Length = 711
Score = 505 bits (261), Expect = e-147
Identities = 297/309 (96%), Gaps = 2/309 (0%)
Strand = Plus / Plus
Query: 4 ggaattcctagatcac-gttggcctattggcatgtcagtccagggatgggtttgggattg 62
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctagatc-cggttggcctattggcatgtcagtccagggatgggtttgggattg 262
Query: 63 tgtttattgttaaacgatgcagcccactgtgggcagcatcatactctaggcttgaccctg 122
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 263 tgtttattgttaaatgatgcagcccattgtgggcagcatcatactctaggcttgaccctg 322
Query: 123 agcaaggacccatgtgtttattcttcttgactcttgactggggatgttatatgagtggct 182
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 323 agcaaggacccatgtgtttattcttcttggctcttgactggggatgttatatgagtggct 382
Query: 183 gcttaaattcttgccttaacttcccccaaagtaatgggcagcaacttggatttgtacgtt 242
|||||| ||| ||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 383 gcttaagttcctgccttaacttcccccaaagtaatgggcagcaacttggatttgaaagtt 442
Query: 243 taaataaaccctttcctccccctaggtttcttttgcccaatgtggtttctctcagctaga 302
|||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||
Sbjct: 443 taaataaaccctttcctccctctaggtttcttttacccaacgtggtttctctcagctaga 502
Query: 303 aatgaaagt 311
|||||||||
Sbjct: 503 aatgaaagt 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_m09.g1 MSMg01no095_m09.g1 CHROMAT_FILE:
MSMg01no095_m09.g1 PHD_FILE: MSMg01no095_m09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:54 2005
(282 letters)
>mm_chr11_112709575_112710256
Length = 682
Score = 418 bits (216), Expect = e-121
Identities = 274/306 (89%), Gaps = 25/306 (8%)
Strand = Plus / Minus
Query: 1 aaggccagcctgagcagtttagtgataccctgtctcaaaaagaacactcaaacgctcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 aaggccagcctgagcagtttagtgataccctgtctcaaaaagaacactcaaacgctcagt 536
Query: 61 ggtagaactcttgcctagcta--gtgtg--------t--gtt-----------actgcaa 97
||||||||||||||||||||| ||||| | ||| |||||||
Sbjct: 535 ggtagaactcttgcctagctagcgtgtgggaggccctaggttcaatccccaggactgcaa 476
Query: 98 gtaaacaaaagaggtgatgtgctgtgtgctggccagactgttctagccttgggtcagtga 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gtaaacaaaagaggtgatgtgctgtgtgctggccagactgttctagccttgggtcagtga 416
Query: 158 tagaagtcaggacagccaagaaggtctgctcggttctttaagtggccaccctattattgc 217
|||||| |||| |||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 415 tagaagccaggccagccaagaaggtctgctgggttctttaagtggccgccctattattgc 356
Query: 218 ttgatatttaggaagtagggcctatggctgcatagggtcaacccga-gtgggacactgag 276
||||||||| |||||| |||||||||||||||||||||||||| | |||||||||||||
Sbjct: 355 ttgatatttgggaagttgggcctatggctgcatagggtcaacct-atgtgggacactgag 297
Query: 277 gtgggt 282
||||||
Sbjct: 296 gtgggt 291
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
