Query= MSMg01no095_p17.b1 MSMg01no095_p17.b1 CHROMAT_FILE:
MSMg01no095_p17.b1 PHD_FILE: MSMg01no095_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:10 2005
(295 letters)
>mm_chr11_4078029_4078723
Length = 695
Score = 534 bits (276), Expect = e-156
Identities = 288/292 (98%)
Strand = Plus / Plus
Query: 1 gtctgtgacccaggaaactgcttgtgccctgcagtatccggcagcagcatgggccaccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 gtctgtgacccaggaaactgcttgtgccctgcagtatccggcagcagcatgggttaccca 260
Query: 61 agccccagttatgtactatcccatgcctttagttcctgggatgtcagtcagccatacgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agccccagttatgtactatcccatgcctttagttcctgggatgtcagtcagccatacgaa 320
Query: 121 gcttctggggatgtttgtaatgtgaggtcagtagctgggagcttgtggtagtgtggactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcttctggggatgtttgtaatgtgaggtcagtagctgggagcttgtggtagtgtggactc 380
Query: 181 ttgtggagatgcggctgctaagacattatcacaggagtgaggtgacagatcactaaacca 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtggagatgcggctgctaagacattatcacaggagtgaggtgacagatcactaaacca 440
Query: 241 gctataggaagtctcgctcagcacagttattaaattcagatctctctctccc 292
||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctctaggaagtctcgctcagcacagttattaaattcagatctctctctccc 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no095_p17.g1 MSMg01no095_p17.g1 CHROMAT_FILE:
MSMg01no095_p17.g1 PHD_FILE: MSMg01no095_p17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:10 2005
(287 letters)
>mm_chr11_4197903_4198589
Length = 687
Score = 555 bits (287), Expect = e-162
Identities = 287/287 (100%)
Strand = Plus / Minus
Query: 1 acccaaggccatgtcaacatgggacactggagagaaaaacatgacccaatcactcatcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 acccaaggccatgtcaacatgggacactggagagaaaaacatgacccaatcactcatcca 267
Query: 61 cctttttacctgccacatctgttttagctcagcatctctgcttttcatccttaaagatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cctttttacctgccacatctgttttagctcagcatctctgcttttcatccttaaagatgt 207
Query: 121 ctgccgttacagagtctcagagctggggaggacctcaaaaagcctctcatcttacttcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ctgccgttacagagtctcagagctggggaggacctcaaaaagcctctcatcttacttcca 147
Query: 181 gcctttgtagataagggacgtgtcagtcagagactatgactcagctgtggtcacacagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 gcctttgtagataagggacgtgtcagtcagagactatgactcagctgtggtcacacagcc 87
Query: 241 tgtggaagagccagctgggaccagatcatggcctctgcctgcccagc 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 tgtggaagagccagctgggaccagatcatggcctctgcctgcccagc 40
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
