Query= MSMg01no096_d07.b1 MSMg01no096_d07.b1 CHROMAT_FILE:
MSMg01no096_d07.b1 PHD_FILE: MSMg01no096_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:28 2005
(429 letters)
>mm_chr11_120257623_120258451
Length = 829
Score = 787 bits (407), Expect = 0.0
Identities = 425/431 (98%), Gaps = 2/431 (0%)
Strand = Plus / Minus
Query: 1 attttctcagcgtcctgctattcatttctctccttcc-ttc-ctttctttctctctctct 58
||||||||||||||||||||||||||||||||||||| ||| || ||| |||||||||||
Sbjct: 711 attttctcagcgtcctgctattcatttctctccttcctttctctctctctctctctctct 652
Query: 59 ctctctctctctctctctctctagttttccatgccaaggtttcttgtgtgtttcttttta 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 ctctctctctctctctctctctagttttccatgccaaggtttcttgtgtgtttcttttta 592
Query: 119 taattagaaacaatgtcagtacattagtttcttctggtgcactggtggcccacatgggta 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 taattagaaacaatgtcagtacattagtttcttctggtgcactggtggcccacatgggta 532
Query: 179 gggtggacaaagtccttaacacttgaggatctttccatcagttgtgagaatgacacctct 238
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gggtggacaaagtctttaacacttgaggatctttccatcagttgtgagaatgacacctct 472
Query: 239 cctttcctaccccataggacccggggcagaaagccctctaggtttgtaccctatagagtc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 cctttcctaccccataggacccggggcagaaagccctctaggtttgtaccctatagagtc 412
Query: 299 tatagcataaagctttcaggatttctgggcatagtttacagcttggtggatttgagggaa 358
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 411 tatagcataaagctttcaggatttctggccatagtttacagcttggtggatttgagggaa 352
Query: 359 ctacttatgctaacatatcagtgaagtgtctttagcaggagcctggcattttgttgttgt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ctacttatgctaacatatcagtgaagtgtctttagcaggagcctggcattttgttgttgt 292
Query: 419 gatgtggtggt 429
|||||||||||
Sbjct: 291 gatgtggtggt 281
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no096_d07.g1 MSMg01no096_d07.g1 CHROMAT_FILE:
MSMg01no096_d07.g1 PHD_FILE: MSMg01no096_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:29 2005
(288 letters)
>mm_chr11_120197308_120197995
Length = 688
Score = 518 bits (268), Expect = e-151
Identities = 283/288 (98%)
Strand = Plus / Plus
Query: 1 agacagtaacaggaaaatctggctgcatcaggaaatgcactcagctccctgctgaaaggg 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agacagtaacaggagaatctggctgcatcaggaaatgcactcagctccctgctgaaaggg 260
Query: 61 aaggctgacctcactgaaggggacataacctcagaagctgaaaattactggaattcataa 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggctgacctcactgaaggggacataacctcagaagctgaaaattactggaattcataa 320
Query: 121 cagcaaaggaagccacagagatgttgactctagcaggaaaattatccacaagtttggccc 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 cagcaaaggaagccacagagatgttgactctagcagtaaaattatccacaagtttggccc 380
Query: 181 atactgcatccactacacctgcactcagaacttccaggcagagcccggggatgaagtaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atactgcatccactacacctgcactcagaacttccaggcagagcccggggatgaagtaac 440
Query: 241 aagaggagagggagggagggtttgcttggcagatgctgcagggctaca 288
|||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 aagaggggagggagggagggcttgcttggcagatgctgcagggctaca 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
