Query= MSMg01no098_g18.b1 MSMg01no098_g18.b1 CHROMAT_FILE:
MSMg01no098_g18.b1 PHD_FILE: MSMg01no098_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:32 2005
(326 letters)
>mm_chr11_65624649_65625374
Length = 726
Score = 580 bits (300), Expect = e-170
Identities = 318/324 (98%), Gaps = 2/324 (0%)
Strand = Plus / Plus
Query: 4 ggaattcagttctctcccactgtgtgggtcccagaggctgaactcaggttgtcaggctta 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagttctctcctactgtgtgggtcccagaggctgaactcaggttgtcaggctta 263
Query: 64 gcagcaagtgactcggcctgctgagccatctcacaagccctcatctgcctttgaaggagg 123
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gcagcaagtgacttggcctgctgagccatctcacaagccctcatctgcctttgaaggagg 323
Query: 124 ttatcagaattaaaaaaatatgtagcatttgtattcaccagacattgactgtttttgctt 183
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttatcagaattaaaaaaatatatagcatttgtattcaccagacattgactgtttttgctt 383
Query: 184 ctttttattcttttctgaagataggagttttctagcagt-gcgaggaatgaatgaccttt 242
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 384 ctttttattcttttctgaagataggagttttctagcagtag-gaggaatgaatgaccttt 442
Query: 243 attcttgtagtggaaattcactagcgacaaattttctgagttctttttgaaaaatttgtt 302
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 443 attcttgtagtggaaattcactagtgacaaattttctgagttctttttgaaaaatttgtt 502
Query: 303 catggctgtgtgtgcatgtggcat 326
||||||||||||||||||||||||
Sbjct: 503 catggctgtgtgtgcatgtggcat 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_g18.g1 MSMg01no098_g18.g1 CHROMAT_FILE:
MSMg01no098_g18.g1 PHD_FILE: MSMg01no098_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:32 2005
(243 letters)
>mm_chr11_65761083_65761725
Length = 643
Score = 462 bits (239), Expect = e-135
Identities = 242/243 (99%)
Strand = Plus / Minus
Query: 1 attttattcctctttattttccgtttcccttaaggtctcttcctcctctctcacagttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 attttattcctctttattttccgtttcccttaaggtctcttcctcctctctcacagttct 515
Query: 61 tcagttgatagatgcctaagctggtttcgtttcctggttactgtgtctagtacaagcagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tcagttgatagatgcctaagctggtttcgtttcctggttactgtgtctagtacaagcagc 455
Query: 121 aaacatggatgccgccctgtagagttttaacaagcataagcgctaattaagtgaaaggcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aaacatggatgccgccctgtagagttttaacaagcataagcgctaattaagtgaaaggcg 395
Query: 181 tcccacatgatttgggcatcaaggagaaggtgtgtggatttcagaatagtccaccagacc 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 394 tcccacatgatttgggcatcaaggagaagatgtgtggatttcagaatagtccaccagacc 335
Query: 241 taa 243
|||
Sbjct: 334 taa 332
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
