CGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTGTTAGACTTGTGATAGGGATATAACTTTGTAGATGACTTTTGGTAA
GATGGCTATTTTTACTCTGTCAGGCCTACTAATCCGTAAGCATGAGAGAT
CATTCCATCTTCTGAGATCTTCTTAGATTTCTTTCTCCAGAGATTTGAAA
TTATTGTCATATATATCTTGCACTTGCTTAAAATAGAGTTACACCAAGAT
ATTTTATATTATTTGTGGCTATTGTAAAGGGTATATTTTCCCTAACATCA
TTCTTAGCCCATATGTTATTTATATAAAAGAAGAATACTGATTGGTTTGA
GTTAATTTTATGCTAACCCATTTTGCTGAAGTTATCAACTGTCGGAGTTC
TATGGTAGAATTTCTGGGGACACTTATGTATACTGTTGTATCATCAACAA
ATAGTGATACCTTGACTTTTTCCTTTCCAATTTGTATCCATGTGATCTCC
TTTTGTTGTCTTATTGCTCTATCTAGAAATCAAGTACTATGTCAAATAGA
TATTAAGAAAATGTCTAACCTTGTCTTGTCCCTGATTTTAGCGGGATTGC
TTCAAGTTTCTCTTCATTAAATTTGATGTTGGTTATTGGTTTACTGGATA
TTGCTTTTATTTTATTTAGCATGTGCCTTGAATTACGAATCTCACCAAGA
ATTTTGACATGAAGGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXTCTTAAACAAGCATAATGAAGCATCACATAAAAGGAGGAGGAAAG
AGCATAAGAACCCATGCACAGGAGAAATATTCTTCGAAATATGGTATTTT
TGGACAAGTCATTGCTTTTTAGTCCATGAATTCACAATAGGTGTGCTTAA
ATGCACAAAATCTGCACAAAAAGAAGCCAGCCAAAATTCTGCCAGGGATA
AAGGGGGTTCTCCACTTATTACTGAGAAGTTATTAGTAATTAAATGTATT
AAGAGAGGGAGAATCATTCTTGTTTGCTTGTATATTCTGGATTGTTTTAA
TGCTACAGTTCATGCCTCTATACTCATAAACATATAGAAAGCACAAATAG
GACTTGTGGGGTTATCAAAAATAACAACAACAATAACAACAACAACAACA
ATAAACATGCATATGAAATGAAGTTAGCAGGGGGTCATGTTATAGTTGCT
ATGGTGGGTATTAGAGGAAGGAAATGGGGAGACTGATTCAAACATGTTTC
AGTGTATAATGGTATAAAGAAAAAAAGGAAAAACATGAGAAGAAAAAGCA
TATTTTCTTCATATTCTTTTATGACAAATCTAAGTATTTTCCATATATGT
TAGCTAAAAAGATAATTGATTTAATTTATGCCATCTGTTTAGCAATCTCT
CAGT

Query= MSMg01no098_h21.g1 MSMg01no098_h21.g1 CHROMAT_FILE:
MSMg01no098_h21.g1 PHD_FILE: MSMg01no098_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:38 2005
         (568 letters)



>mm_chr11_12920379_12921346
          Length = 968

 Score = 1023 bits (529), Expect = 0.0
 Identities = 559/569 (98%), Gaps = 1/569 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcttaaacaa-gcataatgaagcatcacataaaaggaggaggaaagagcataagaaccca 59
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tcttaaacaaagcataatgaagcatcacataaaaggaggaggaaagagcataagaaccca 259

                                                                       
Query: 60  tgcacaggagaaatattcttcgaaatatggtatttttggacaagtcattgctttttagtc 119
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgcacgggagaaatattcttcgaaatatggtatttttggacaagtcattgctttttagtc 319

                                                                       
Query: 120 catgaattcacaataggtgtgcttaaatgcacaaaatctgcacaaaaagaagccagccaa 179
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 320 catgaattcacaataggtgtgcttaaatgcgcaaaatctgcacaaaaagaagccagccaa 379

                                                                       
Query: 180 aattctgccagggataaagggggttctccacttattactgagaagttattagtaattaaa 239
           |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 380 aattctgccagggataaagggggttccccacttattgctgagaagttattagtaattaaa 439

                                                                       
Query: 240 tgtattaagagagggagaatcattcttgtttgcttgtatattctggattgttttaatgct 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgtattaagagagggagaatcattcttgtttgcttgtatattctggattgttttaatgct 499

                                                                       
Query: 300 acagttcatgcctctatactcataaacatatagaaagcacaaataggacttgtggggtta 359
           ||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||
Sbjct: 500 acagttcatgcctctatactcgtgaacatatagagagcacaaataggacttgtggggtta 559

                                                                       
Query: 360 tcaaaaataacaacaacaataacaacaacaacaacaataaacatgcatatgaaatgaagt 419
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 560 tcaaaaataacaacaacaataacaacaacaacaacaataaacatgcatatgaaacgaagt 619

                                                                       
Query: 420 tagcagggggtcatgttatagttgctatggtgggtattagaggaaggaaatggggagact 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tagcagggggtcatgttatagttgctatggtgggtattagaggaaggaaatggggagact 679

                                                                       
Query: 480 gattcaaacatgtttcagtgtataatggtataaagaaaaaaaggaaaaacatgagaagaa 539
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 680 gattcaaacatgtttcagtgtataatggtataaagaaaaaaaggaaaaacatgaaaagaa 739

                                        
Query: 540 aaagcatattttcttcatattcttttatg 568
           |||||||||||||||||||||||||||||
Sbjct: 740 aaagcatattttcttcatattcttttatg 768


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 968
Length adjustment: 10
Effective length of query: 558
Effective length of database: 958
Effective search space:   534564
Effective search space used:   534564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)