Query= MSMg01no098_p12.b1 MSMg01no098_p12.b1 CHROMAT_FILE:
MSMg01no098_p12.b1 PHD_FILE: MSMg01no098_p12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:14 2005
(506 letters)
>mm_chr11_112301072_112301977
Length = 906
Score = 557 bits (288), Expect = e-163
Identities = 328/358 (91%), Gaps = 26/358 (7%)
Strand = Plus / Minus
Query: 149 acatgtatatatatgtctgtgtgtgtattatctctctctctctctctctctctctctcta 208
|||||||||||||||||||||||||||||| ||||
Sbjct: 906 acatgtatatatatgtctgtgtgtgtatta--------------------------tcta 873
Query: 209 tctatctatctatctatctatctatctatctatcaaaaatttgcactaatactcaaagat 268
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 872 tctatctatctatctatctatctatctatctatcaaaaatttgcactaagactcaaagat 813
Query: 269 ttatgtgtctggaatgccatgttcaaagtaccattattcatcataagccacagacagagc 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 ttatgtgtctggaatgccatgttcaaagtaccattattcatcataagccacagacagagc 753
Query: 329 aaactaagtgttcaatgacaaccgcatcagtaaaggtaatatgctaattgtgatctggaa 388
||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 752 aaactaagtgttcaatgacaattggatcagtaaaggtaatatgctaattgtgatctggaa 693
Query: 389 atatttcccagtggaatgtttgcatagcacataaaaagtcctaactttattcttagcacc 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 atatttcccagtggaatgtttgcatagcacataaaaagtcctaactttattcttagcacc 633
Query: 449 atataaactaggtgttgtggctcacaactgtaacatctgcatggagaaggtgaatgtg 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 atataaactaggtgttgtggctcacaactgtaacatctgcatggagaaggtgaatgtg 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_p12.g1 MSMg01no098_p12.g1 CHROMAT_FILE:
MSMg01no098_p12.g1 PHD_FILE: MSMg01no098_p12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:14 2005
(246 letters)
>mm_chr11_112192373_112193018
Length = 646
Score = 453 bits (234), Expect = e-132
Identities = 243/246 (98%)
Strand = Plus / Plus
Query: 1 ctcatctctcagtcctcaccaatgatatttattcttgtagtagatggtgcttaacgaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcatctctcagtcctcaccaatgatatttattcttgtagtagatggtgcttaacgaagg 260
Query: 61 acacctataactcattaacagaaagggaatgggagacttcagagtccatagccttataac 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 acacctataactcattaacagaaagggaatgggagacttcagagtgcatagccttataac 320
Query: 121 ttcgttcctcctcctaaggttcaaggatcattgtagacgagggatcagaaagatgtaaga 180
|||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 321 ttcgttcctcctcctaaggttcaaagatcattgtagaagagggatcagaaagatgtaaga 380
Query: 181 accagaggctggagatacaaggaaagagtgttttatgaacacagtaaagcaggtgcatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accagaggctggagatacaaggaaagagtgttttatgaacacagtaaagcaggtgcatat 440
Query: 241 ataaac 246
||||||
Sbjct: 441 ataaac 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
