Query= MSMg01no104_p23.b1 MSMg01no104_p23.b1 CHROMAT_FILE:
MSMg01no104_p23.b1 PHD_FILE: MSMg01no104_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:04:28 2005
(600 letters)
>mm_chr11_121606964_121607964
Length = 1001
Score = 1091 bits (564), Expect = 0.0
Identities = 591/604 (97%), Gaps = 8/604 (1%)
Strand = Plus / Minus
Query: 5 gaattccatgctctcctcacctattgaagac-atctttctctagccttttgtgttttagc 63
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 652 gaattccatgctctccttacctattgaagacaatctttctctagccttttgtgttttagc 593
Query: 64 catacttttctttttagcttcacactcaccaagatataaacttatggggctgaattaaac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 catacttttctttttagcttcacactcaccaagatataaacttatggggctgaattaaac 533
Query: 124 cagaaggacgcctgtaaaccttcaggttcattttcaccacttgtaggactcaatcctttt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 cagaaggacgcctgtaaaccttcaggttcattttcaccacttgtaggactcaatcctttt 473
Query: 184 tggccatgcttcagcctctaacagaagaccgcaaagcttgagactaggggctgcttgcag 243
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 472 tggccatgcttcagcctctaacagaagaccacaaagcttaagactaggggctgcttgcag 413
Query: 244 gtatgcctcctgctcactccacccagcccccaaaggacataactttctccttgagtctct 303
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 412 gtatgcctcctgctcactccacccagcccccaaaggacatagctttctccttgagtctct 353
Query: 304 ctgtggatttgccaggagaagcaaagtaccctatagacctaagaagacttgttaattcca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ctgtggatttgccaggagaagcaaagtaccctatagacctaagaagacttgttaattcca 293
Query: 364 cagcagggtcatcaagatcccagatcaagaaacagatagcgtacctttggtatgtcaggc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 cagcagggtcatcaagatcccagatcaagaaacagatagcgtacctttggtatgtcaggc 233
Query: 424 tcaagtagaagcctaacatcacagtc-------actggaagtaaaaattttactgaaaga 476
|||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 232 tcaagtagaagcctaacatcacagtcaccttttactggaagtaaaaattttactgaaaga 173
Query: 477 agaaacaattatgtaatgtattgtgaacctaaatgactatttctgatacacaatctggcc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 agaaacaattatgtaatgtattgtgaacctaaatgactatttctgatacacaatctggcc 113
Query: 537 taggaaccagtcatcttcctgttccctctgtgacttcacttcctgagtctgaggactcag 596
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 112 taggaaccagtcatcttcctgttccctctgtgacttcacttcctgagcctgaggactcag 53
Query: 597 agga 600
||||
Sbjct: 52 agga 49
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1001
Length adjustment: 10
Effective length of query: 590
Effective length of database: 991
Effective search space: 584690
Effective search space used: 584690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no104_p23.g1 MSMg01no104_p23.g1 CHROMAT_FILE:
MSMg01no104_p23.g1 PHD_FILE: MSMg01no104_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:04:28 2005
(290 letters)
>mm_chr11_121479979_121480668
Length = 690
Score = 499 bits (258), Expect = e-146
Identities = 282/290 (97%), Gaps = 1/290 (0%)
Strand = Plus / Plus
Query: 1 aagaccagttcgagctacaaagtaacactctgtgtcaataaacaacctcactcaagaaga 60
|||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 201 aagaccagctcgagctacaaagtaacactctgtgtcaataagcaacctaactcaagaaga 260
Query: 61 tcaaggcctgggatcaatcaaaatcttgatcactgaagttgagaagttagatgtattaaa 120
||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 261 tcaaggcctgggatcaatcaagatcttgatcacttaagttgagaagttagatgtattaaa 320
Query: 121 gttaatttatcattttaatgtgaaatgcctctgacaggttcatgtttgaacattctgtcc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 gttaatttatcattttaatgtgaaatgcctctgacaggttcatgtttgaacattttgtcc 380
Query: 181 cagttgttggcaccctttggaaatagggcctagttgaaggagtagccactggagggatac 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 381 cagttgttggcaccctttggaaatagggcctagttgaaggagtggccactggagg-atac 439
Query: 241 agcttgaggtctggagcctcagccttgcttctggacccctctctactgcc 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agcttgaggtctggagcctcagccttgcttctggacccctctctactgcc 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
