Query= MSMg01no106_e17.b1 MSMg01no106_e17.b1 CHROMAT_FILE:
MSMg01no106_e17.b1 PHD_FILE: MSMg01no106_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:06:31 2005
(348 letters)
>mm_chr11_90216796_90217545
Length = 750
Score = 555 bits (287), Expect = e-162
Identities = 331/349 (94%), Gaps = 8/349 (2%)
Strand = Plus / Minus
Query: 5 gaattcaccttttcttccccaggacttaacctcacccttgccc-----cgtctctacgta 59
||||||||||||| |||||||||| |||||||||||| |||| ||||||||||||
Sbjct: 550 gaattcaccttttattccccagga--taacctcaccctcgccctacctcgtctctacgta 493
Query: 60 gttccagatattggagtggagtgtgggacagggaaatggtgcttgacagggacagagaga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gttccagatattggagtggagtgtgggacagggaaatggtgcttgacagggacagagaga 433
Query: 120 gcaagccatcttgtttcccacccatcgcatctggcatctgtatccacctctgaggctttg 179
||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 432 gcaagccatcttgtttcccacccatggcatctggcatctgtatccacctccaaggctttg 373
Query: 180 aagctgcaatatcccaagcacaactcacgctggcactcagtgctgttggcaccgtgagtt 239
||||||||| ||||||||| |||||||||||||| |||||||||||||||||| ||||||
Sbjct: 372 aagctgcaagatcccaagcgcaactcacgctggcgctcagtgctgttggcaccatgagtt 313
Query: 240 catttgtggcctcctgaagtgttattactgcttagagaagccacagtcatacatgctggc 299
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 catttgtggcctcctga-gtgttattactgcttagagaagccacagtcatacatgctggc 254
Query: 300 ttctgccactctgtgacaccctcaccccaacctccaactgggcctgggt 348
|||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 253 ttctgccactctgtgacaccctcaccccaacctccaaccgggcctgggt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 750
Length adjustment: 9
Effective length of query: 339
Effective length of database: 741
Effective search space: 251199
Effective search space used: 251199
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no106_e17.g1 MSMg01no106_e17.g1 CHROMAT_FILE:
MSMg01no106_e17.g1 PHD_FILE: MSMg01no106_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:06:31 2005
(546 letters)
>mm_chr11_90061043_90061988
Length = 946
Score = 994 bits (514), Expect = 0.0
Identities = 538/546 (98%)
Strand = Plus / Plus
Query: 1 aacaacagagctttccaaattgtggttaaaatctatttggaccgtgcctgagatgggaaa 60
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 201 aacaacagagctttccaaattgtggttaaaatctatttgaaccatgcctgagatgggaaa 260
Query: 61 gcataaaaattatggctgatttttctcatgcaccatttctgggagacggaatggtggatt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcataaaaattatggctgatttttctcatgcaccatttctgggagacggaatggtggatc 320
Query: 121 tgctggcccgctcatctctctcactctgagcccatatcataagctctctacccccaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgctggcccgctcatctctctcactctgagcccatatcataagctctctacccccaagaa 380
Query: 181 atgtcaagggcatagaccaagagttaaaaattgttctttagggaacacgagttgccaagc 240
||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 381 atgtcaagggcatagaccaagagttaaaaatcgttctttagggaacacgagctgccaagt 440
Query: 241 ccatccccttaatctggctgacagagttgcattttgctttggcttgcacaatgacagggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccatccccttaatctggctgacagagttgcattttgctttggcttgcacaatgacagggc 500
Query: 301 tagagaggactctcatggtcaatgagtccaaaccaggagtacatggcaagcagacaggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagagaggactctcatggtcaatgagtccaaaccaggagtacatggcaagcagacaggat 560
Query: 361 cagtgtcctgcttggaggctgaggaggtggctcagtgggtaaggcactgaccttcagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagtgtcctgcttggaggctgaggaggtggctcagtgggtaaggcactgaccttcagaag 620
Query: 421 ccatgcaagcttggcaccatagccataacctgcgattccacctttcctgtggcgggagag 480
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 621 ccatgcaagcttggcaccatagccataccctgcgattccacctttcctgtggcgggacag 680
Query: 481 gaggcagagacactgcctccaacaaggtgaaagcaaggattgacagagaagttatcttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaggcagagacactgcctccaacaaggtgaaagcaaggattgacagagaagttatcttct 740
Query: 541 gacctc 546
||||||
Sbjct: 741 gacctc 746
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 946
Length adjustment: 10
Effective length of query: 536
Effective length of database: 936
Effective search space: 501696
Effective search space used: 501696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
