Query= MSMg01no106_n07.b1 MSMg01no106_n07.b1 CHROMAT_FILE:
MSMg01no106_n07.b1 PHD_FILE: MSMg01no106_n07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:07:49 2005
(590 letters)
>mm_chr11_84674923_84675912
Length = 990
Score = 1035 bits (535), Expect = 0.0
Identities = 573/597 (95%), Gaps = 19/597 (3%)
Strand = Plus / Minus
Query: 1 tcctgctcctgcctctgctgctgctgctccccttcctcttcctcttctcccttctccctt 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 598 tcctgctcctgcctctgctgctgctgctcctcttcctcttcctcttctcccttctccctt 539
Query: 61 ctcccttctc------------------ctcctcctccttacctaggcttttgcctaggt 102
|||||||||| |||||||| ||||||||||||| |||||||||
Sbjct: 538 ctcccttctcccttctcccttctcccttctcctccttcttacctaggcttctgcctaggt 479
Query: 103 attaatagtgtactaaagttgatttcatttttactgttgtagtaaatatagttatgtacc 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 attaatagtgtactaaagttgatttcatttttactgttgtagtaaatatagttatgtacc 419
Query: 163 tgacttacagattactcatgtgaaagaattgagttgtgttcacgttttacaggtctaaaa 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tgacttacagattactcatgtgaaagaattgagttgtgttcacgttttacaggtctaaaa 359
Query: 223 atctttgatcaggtcatctcttctagtttttataagatagggtgtgcaacattttattaa 282
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gtctttgatcaggtcatctcttctagtttttataagatagggtgtgcaacattttattaa 299
Query: 283 gaacttgttgggggtggggggccggagagatggctcagcggttaagaacatctctctgct 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gaacttgttgggggtggggggccggagagatggctcagcggttaagaacatctctctgct 239
Query: 343 cttccagaggtcctgagttcaaatcccagcaactacatggtgcctcacaaccatctataa 402
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 238 cttccagaggtcctgagttcaaatcccagcaactacacggtgcctcacaaccatctataa 179
Query: 403 taagatctgacgccctcttctgatgtgtctaaagacagctacagtgtacttacatataat 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 taagatctgacgccctcttctgatgtgtctaaagacagctacagtgtacttacatataat 119
Query: 463 aaaataaataaatctttaaaaaaaaaaaaaaagaacttgttggggccagggatgtcactt 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 aaaataaataaatctttaaaaaaaaaaaaaaagaacttgttggggccagggatgtcactt 59
Query: 523 ggtgccagagtatttttttcagcatgtgttaggtcctgagtttgatcccctggacta 579
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 ggtgccagagta-ttttttcagcatgtgttaggtcctgagtttgatcccctggacta 3
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space: 568400
Effective search space used: 568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no106_n07.g1 MSMg01no106_n07.g1 CHROMAT_FILE:
MSMg01no106_n07.g1 PHD_FILE: MSMg01no106_n07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:07:49 2005
(387 letters)
>mm_chr11_84519522_84520308
Length = 787
Score = 694 bits (359), Expect = 0.0
Identities = 380/391 (97%), Gaps = 8/391 (2%)
Strand = Plus / Plus
Query: 1 gggatggacatgagactgggggtgagtcagagttcatgagattccactcccccaaatgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gggatggacatgagactgggggtgagtcagagttcatgagattccactcccccaaatgta 260
Query: 61 gagattcttggcaatcatggaggtcctatttcaccagagaggtgaagcacttcagccaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagattcttggcaatcatggaggtcctatttcaccagagaggtgaagcacttcagccaag 320
Query: 121 gtcacacagctgggtgtaccataaataggtgatggatctgctgagattactcaccatccc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 gtcacacagctgggtgtaccataaataggtgatggatctgctgagattactcaccaaccc 380
Query: 181 caattacatcttcaccactaataacttggctcacgctcccctaatgggatttcctccttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caattacatcttcaccactaataacttggctcacgctcccctaatgggatttcctccttg 440
Query: 241 gacatcagccttcccttccccccttccactgacactggccaattatttt----agggcag 296
||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 gacatcagccttcccttccccccttccactgacactggccaatta----gacaagggcag 496
Query: 297 gtgctgtgattggggtcacagtgagaggaagagatggagaggttcacagctcacccccaa 356
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 497 gtgctgtgattggggtcacagtgagaggaagagatggagagggccacagctcacccccaa 556
Query: 357 cctcagctgagaaagaggtgatccgtctcag 387
|||||||||||||||||||||||||||||||
Sbjct: 557 cctcagctgagaaagaggtgatccgtctcag 587
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 787
Length adjustment: 9
Effective length of query: 378
Effective length of database: 778
Effective search space: 294084
Effective search space used: 294084
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
