Query= MSMg01no109_o13.b1 MSMg01no109_o13.b1 CHROMAT_FILE:
MSMg01no109_o13.b1 PHD_FILE: MSMg01no109_o13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:17 2005
(458 letters)
>mm_chr11_65165099_65165958
Length = 860
Score = 812 bits (420), Expect = 0.0
Identities = 450/460 (97%), Gaps = 2/460 (0%)
Strand = Plus / Minus
Query: 1 taaggaag-attttgaaatgaggac-aagatgttcctggattttctggttggaatctaaa 58
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 660 taaggaagaattttgaaatgaggacaaagatgttcctggattttctggttggaatctaaa 601
Query: 59 tcccgtcttgggtgtggttataagagacaggcagggccagcccacattgtccatgggaga 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tcccgtcttgggtgtggttataagagacaggcagggccagcccacattgtccatgggaga 541
Query: 119 caaagggagagggtgcatgaccacaagccaagaaaagctggcagccgttaagtatccact 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 caaagggagagggtgcatgaccacaagccaagaaaagctggcagccgttaagtatccact 481
Query: 179 gaagtgagtgtccctagaatgtgactactgacacctccgtttcaagtgaaagtttttcac 238
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 480 gaagtgagtgtccctagaatgtggccactgacacctccgtttcaagtgaaagtttttcac 421
Query: 239 tttcctaaacataatatgacgcactgacatgatattattccaaaatggacagagctatgt 298
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tttcctaaacagaatatgacgcactgacatgatattattccaaaatggacagagctatgt 361
Query: 299 tactatcttctgtgtaagtcacatattccttctacaggaaaaggtgtgcggcttcagaat 358
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 360 tactatcttctgtgtaagtcacatattccttctacaggaaaaggtgtgtggcttcagaat 301
Query: 359 tttgtgaatttcatttagcatttgttgatagcaaaatgttttcgcagaccaaggatttgt 418
||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 300 tttgtgaatttcacttagtatttgttgatagcaaaatgttttcgcagaccaaagatttgt 241
Query: 419 ttctttctaacaagttgcaactcactgcgttatatttaag 458
||||||||||||||||||||||||||| ||||||||||||
Sbjct: 240 ttctttctaacaagttgcaactcactgtgttatatttaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 860
Length adjustment: 10
Effective length of query: 448
Effective length of database: 850
Effective search space: 380800
Effective search space used: 380800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no109_o13.g1 MSMg01no109_o13.g1 CHROMAT_FILE:
MSMg01no109_o13.g1 PHD_FILE: MSMg01no109_o13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:17 2005
(451 letters)
>mm_chr11_65033662_65034512
Length = 851
Score = 785 bits (406), Expect = 0.0
Identities = 439/450 (97%)
Strand = Plus / Plus
Query: 2 gtcacgtatgcctgagagcccttagaactcttgacagcctttcctctgggttctgtgcca 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gtcacgtatgcctgagagcccttagaactcttgacagcctttcctctgggttctgtgcca 261
Query: 62 tctacattctgtcttacagcgtctcacttaattccatggttggagaaaagccagtaagct 121
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 262 tctacattctgtcttacagcgtctcacttaattccatggttggagaagagccagtaagct 321
Query: 122 aggagagtcagagaggatgctaaccaatggggaaagactcacaacttctaccccatttca 181
|| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 agaagagtcagagaggatgttaaccaatggggaaagactcacaacttctaccccatttca 381
Query: 182 gggcttttcctgctctgtaaagctggaatgccgtcttggaaggaaatctgcattctggag 241
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gggcctttcctgctctgtaaagctggaatgccgtcttggaaggaaatctgcattctggag 441
Query: 242 agagtatactgctgctgggtgcacgctgcacctccaccttatatgctcttccttcttcct 301
|||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 442 agagcacactgctgctgggtgcacgctgcacctccaccttaaatgctcttccttcttcct 501
Query: 302 gggcttgctccatgcttcctatccacggtccttgctttccctttcccaggctattctgag 361
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 502 gggcttgcttcatgcttcctatccaaggtccttgctttccctttcccaggctattctgag 561
Query: 362 ccagatgtctcccttccctggcctcccctgtactttcggaataccatgcactttctctcc 421
||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 562 ccagacgtctcccttccctggcctcccctgcactttcggaataccatgcactttctctcc 621
Query: 422 tgtgctgggttctggatgctgattctcgtg 451
||||||||||||||||||||||||||||||
Sbjct: 622 tgtgctgggttctggatgctgattctcgtg 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
