Query= MSMg01no115_b17.b1 MSMg01no115_b17.b1 CHROMAT_FILE:
MSMg01no115_b17.b1 PHD_FILE: MSMg01no115_b17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:58 2005
(344 letters)
>mm_chr11_58754930_58755673
Length = 744
Score = 584 bits (302), Expect = e-171
Identities = 305/306 (99%)
Strand = Plus / Minus
Query: 1 tatttattttcacatctaaaatatttaaaaggtaatagttattaggtaactggcttgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tatttattttcacatctaaaatatttaaaaggtaatagttattaggtaactggcttgatg 247
Query: 61 caatattctttgaagtggagtttatgttttattattaaacagttttgggtctgtaaagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 caatattctttgaagtggagtttatgttttattattaaacagttttgggtctgtaaagat 187
Query: 121 ggttcagcacttaagttgctctcttagaagagagattccagtgcccatggatttccagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ggttcagcacttaagttgctctcttagaagagagattccagtgcccatggatttccagtg 127
Query: 181 cccacgttgagtggctcacagcatcctataactcaggttccatggtatttgatatcctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 cccacgttgagtggctcacagcatcctataactcaggttccatggtatttgatatcctct 67
Query: 241 tctgtcctccacaggtacccataggcatgtgcagacatacacacaaacacaaacacaaat 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 tctggcctccacaggtacccataggcatgtgcagacatacacacaaacacaaacacaaat 7
Query: 301 taaatc 306
||||||
Sbjct: 6 taaatc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no115_b17.g1 MSMg01no115_b17.g1 CHROMAT_FILE:
MSMg01no115_b17.g1 PHD_FILE: MSMg01no115_b17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:58 2005
(519 letters)
>mm_chr11_58596558_58597477
Length = 920
Score = 919 bits (475), Expect = 0.0
Identities = 509/521 (97%), Gaps = 3/521 (0%)
Strand = Plus / Plus
Query: 1 ttttgaaaaggacccataaatttatcaatataaaattttctgttgctacctaatttttct 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 ttttgaaaaggacccataaatttatcaatataaaattttctgttgctgcctaatttttct 260
Query: 61 cacgcagatcgattttcatttcagtatccagaaatttggactttaaattttacagattaa 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caagcagatcgattttcatttcagtatccagaaatttggactttaaattttacagattaa 320
Query: 121 caattaatttgggaaaacgtggaaaggaaattgtgtgtcctgacttgtctgtggtttctc 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 caattaatttgggaaaacgtggaaaggaaattgtgtgttctgacttgtctgtggtttctc 380
Query: 181 aaggggcctttgtcagaagaaaaggcaaccatctatctctgtccatgactaaatgcaaaa 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 aaggggcctttgtcagaagaaaaggcagccatctatctctgtccatgactaaatgcaaaa 440
Query: 241 gcggggagtgcagttgtaagtagggacgtcacagcactcacggcgttctaagagagaacg 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 441 gcggggagtgcagttgtaagtagggacgtcacagcactcacggcattctaagagaaaacg 500
Query: 301 tgggcaggcaggactgagagatctaactctg--gacacagaacacacacagtagaaggaa 358
|||||||||||||||||| |||||||||||| ||||||||||||| | |||||||||||
Sbjct: 501 tgggcaggcaggactgagggatctaactctgtggacacagaacacagagagtagaaggaa 560
Query: 359 gcccttggttctcaggtgaaacatttccccattcccttactagtcagactgggcatctca 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcccttggttctcaggtgaaacatttccccattcccttactagtcagactgggcatctca 620
Query: 419 gtaatgaggttagcaccttaccctaacgagctaacgattcaggaccaattccaaccatga 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtaatgaggttagcaccttaccctaacgagctaacgattcaggaccaattccaaccatga 680
Query: 479 tttacttccatgatcagatttttttttaggaacttatccca 519
|||||||||||||||||||||||||| ||||||||||||||
Sbjct: 681 tttacttccatgatcagatttttttt-aggaacttatccca 720
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 920
Length adjustment: 10
Effective length of query: 509
Effective length of database: 910
Effective search space: 463190
Effective search space used: 463190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
