Query= MSMg01no118_p23.b1 MSMg01no118_p23.b1 CHROMAT_FILE:
MSMg01no118_p23.b1 PHD_FILE: MSMg01no118_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:01 2005
(318 letters)
>mm_chr11_42714528_42715245
Length = 718
Score = 528 bits (273), Expect = e-154
Identities = 300/311 (96%), Gaps = 5/311 (1%)
Strand = Plus / Minus
Query: 4 ggaattcctttccta-ttcaccctatttttgatatagcttctgtctaaatgtgaattatt 62
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 ggaattccttccctatttcaccctatttttgatatagcttctgtctaaatgtgaattatt 659
Query: 63 tcagtgattgctgatgccttctgttttgtatatcctggtagatcttaatgacttccagag 122
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 tcagtgattgctgatgttttctgttttgtatatcctggtagatcttaatgacttccagag 599
Query: 123 gtcaggactaacactcctggcattcggcagtaaatgaatgaatgaatgaagtcaaatgga 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gtcaggactaacactcctggcattcggcagtaaatgaatgaatgaatgaagtcaaatgga 539
Query: 183 tattgaatggatgaatgaatgaatgaatgttcagggcagcacgcagaggtgttttctgtc 242
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tattgaatg----aatgaatgaatgaatgttcagggcagcacgcagaggtgttttctgtc 483
Query: 243 tcatcagctcatttgttagaccactgtacaaatgtctatctagcctcctttcctggcgct 302
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 482 tcatcagctcatttgttagaccactgtacaaatgtctatctagcctcctttcctggtgtt 423
Query: 303 tgtattcagga 313
| |||||||||
Sbjct: 422 tatattcagga 412
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no118_p23.g1 MSMg01no118_p23.g1 CHROMAT_FILE:
MSMg01no118_p23.g1 PHD_FILE: MSMg01no118_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:01 2005
(347 letters)
>mm_chr11_42571088_42571834
Length = 747
Score = 395 bits (204), Expect = e-114
Identities = 314/376 (83%), Gaps = 44/376 (11%)
Strand = Plus / Plus
Query: 1 tttc-ttatttttaagctgcacataccaaaggaaagaaagcacacaatataatacttttt 59
|||| |||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 193 tttcattatttttaagctgcacaaaccaaaggaaagaaagcatacaatataatac----- 247
Query: 60 tctttttttttttttacccaatctgtggatatccaggagactatcttggtccttgcaact 119
||||||| |||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 248 -------tttttttgacccaatctgtggatatccaggggagtatcttggtccttgcaact 300
Query: 120 tag-------------------aggaccgcataaccaataaaacatatacatttgtaatt 160
||| |||||| ||||||||||| |||||||||||||||||||
Sbjct: 301 tagaggctggctgtgttaaaacaggaccacataaccaatagaacatatacatttgtaatt 360
Query: 161 ggagtgtgctagattgaattagagacttacagaatagtcccacaagggctgtttatggtc 220
||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 361 ggagtgtactagattgaattagagacttacagaatagtctcacaagggctgtttatggtc 420
Query: 221 ttgagagcataggaaccagtaggaactagtagtactagtgtacaaaagcaagaacagagt 280
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 421 ttgagagcataggaaccagtaggaactagtagtattagtgtacaaaagcaaaaacagagt 480
Query: 281 ggaataggaagggacacacacac-c---------cagacagagagagacagagacagaca 330
|||| |||||| |||||||||| | || ||| | | | ||||| |||||||
Sbjct: 481 ggaagaggaag--acacacacacacacacacacacacacacacacacacagacacagaca 538
Query: 331 cagagagagagagaga 346
||||||||||||||||
Sbjct: 539 cagagagagagagaga 554
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
