Query= MSMg01no122_h10.b1 MSMg01no122_h10.b1 CHROMAT_FILE:
MSMg01no122_h10.b1 PHD_FILE: MSMg01no122_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:30:56 2005
(333 letters)
>mm_chr11_117927183_117927915
Length = 733
Score = 582 bits (301), Expect = e-170
Identities = 322/329 (97%)
Strand = Plus / Plus
Query: 1 ctccctcgggcctctacacttccctgcgtggtctccgctctgccctcctctgctgaggcc 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 ctccctcgggcctctacacttccctgcgtggtctccgctctgccctcttctgctgaggcc 260
Query: 61 aaacattgggtaattaagacacgctgctttgcccttgtcaccctgtatcctggccctttt 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 aaacattgggtaattaagacacgctgctttgctcttgtcaccctgtatcctggccctttt 320
Query: 121 tggagggcaccggtgacatctggtgtctttcctgattggcctctctttggggaggggtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggagggcaccggtgacatctggtgtctttcctgattggcctctctttggggaggggtgt 380
Query: 181 ggtgggccttttctctgcctcccttggagccccctcaccttgaggtctgggattccgtag 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 ggtgggccttttctctgcctcccttggagccccctcaccttgaggtctgggattgcgtag 440
Query: 241 cctttcttgagtgtgatctggaagacgtccagggcacttatgtatgcggctaggcgtgag 300
|||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||
Sbjct: 441 cctttcttgagtgtgatctggaagacgtccagggcactgatgtaggcggctaggcgcgag 500
Query: 301 aggctctgcttcccactgccgcccacgcc 329
|||||||||||||||||||| ||||||||
Sbjct: 501 aggctctgcttcccactgccacccacgcc 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no122_h10.g1 MSMg01no122_h10.g1 CHROMAT_FILE:
MSMg01no122_h10.g1 PHD_FILE: MSMg01no122_h10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:30:56 2005
(578 letters)
>mm_chr11_118100190_118101167
Length = 978
Score = 503 bits (260), Expect = e-146
Identities = 305/326 (93%), Gaps = 15/326 (4%)
Strand = Plus / Minus
Query: 1 agctcacgcctttccgtcctggagtccctcacacacacgaacaactttccttttgtcgtt 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 agctcacgcctctccgtcctggagtccctcacacacacgaacaactttccttttgtcgtt 252
Query: 61 cttcattgaccatcccaggtattcaggcttgaaaccatgagatcctcattatctctctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 cttcattgaccatcccaggtattcaggcttgaaaccatgagatcctcattatctctctct 192
Query: 121 ctctctccctccctccctctctctttctctctctctctctctttctctctctctctctct 180
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 191 ctctctccctccctc----tctctttctctctctctctctct--ctctctctctctctct 138
Query: 181 ctctctctctctctcttcctttctcttttcctctctccccttctctctctttctctgtct 240
|| ||| | ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 137 ctttct-t-----tcttcctttctcttttcctctctccccttttctctctttctctgtct 84
Query: 241 ttctctccccccctcccctttctggtgtcatcttctttgtgctgaagtcctttgagttag 300
||||||||||||| ||||||||||||||||||||| | | ||||||||||||||||||
Sbjct: 83 ttctctcccccccgcccctttctggtgtcatcttca--ggg-tgaagtcctttgagttag 27
Query: 301 actggtctctcactggtctggagctc 326
||||||||||||||||||||||||||
Sbjct: 26 actggtctctcactggtctggagctc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 61
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space: 549824
Effective search space used: 549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
