TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCTGTGTAGCCCACGATAACCTTGAACTTCTGAGTTTGTGATTCT
GCTGCCTCCACTTCACAAGTGTAGGGATTCAAAAAGTACCATACTCAGCT
TATGCAGTCATAAGTACCGAATGTCATGTGTGCTAGACAAGTACTCTAAC
AACTGAGCTACAGACTCAGCTCTTTCCACTGCTTTCTTTAACCTATCAAA
TTAGTTGCTGTTATCAGCCTTTGATATGGACATTTATTTAAATTTACCGA
CACTTTAACAACTTCATTGCTCAACATGACCTTTTCTTGGTTAATTCTGC
TCAGGGATGCAGTTTCTTCCTAATTAGTCTTTCTACTCAAAATGTGGTAG
TTGTTTTAACAGCTTGCCGCTTGCTGGAACTGTTAAATCTCCTACACCTA
TTAAATTAGAATCTGCACATTTATGAGATCACTACGTGACTTATAAATGC
ATTAAAGCCCACGCAGTTCTCAGCGTGACATGAGATGCTGTGTACCCAAC
ACTAACCAAATAATCTCTTTCTTGCTGGTTCTGGCCCAAGTGAAACAATT
TGCAGCAAGGTTTGACGCTCATCTAGTTTAACATGCAGACAGTAAAAAGT
GTCAAGCTGCTACATTTGAAATGAACATTATATTTATCTTGAAGTGACTA
TTGAGTGTGTGGGTGTTCTGCTTCACATCGGCTGTCTG

CGATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCCTTCAAGTCTAGAAGAGTGAAAC
TATGAGGGATTTTTTAAAATTAATTACTTAATTAATTAGTTAATCAGTTA
ATTTATTTATTTATAGTTACTTATAGGAACATGGGAGACTCAAAAGGCAG
CTATACTACTTAGAGGTACCTTGAACAATTGATGGGCAGCTCCTCCACCA
AGAAAGCCCACCTCCATCAATTGCCACATTATCAACAGGCATCACTGGAA
CCCGAAGAAGGAAAGAGGCCGGTGCAAATCCCATGAGCCTTCCTGCTCCT
TCTGTAGGGAGTGTCAATAACCATGATCTTAAGAGGTTTTTTTTGTGGGT
GCTGACAGCCACTCAGCCCCAAGATAGTGATGGGCATCTCCAACCTAGAA
AAAAAAGCTCTTTTACTATAATGCTTGATAAAGATTTTAAATACAAGCGT
GTATATCTTCAATAGTTTCTCCTTCACTAATTCTTGTATTATTTCCATTT
TAAAGTGACAGAGACCTGTCTTAAAAAAACCCAAGAGTGCCAATAGACCT
TTATGTATAAAATATCTCTACTTAAACAACTTTTCATTATTTACACTGGA
AATTCTTTGAGGATTAAAATCTATTCTTTCTCTTTCTCTGTTGCATAGTT
AGTTGCCTCGACTCTTCTGGGAAAGATGCTTGTTTTTCTCT

Query= MSMg01no128_p16.b1 MSMg01no128_p16.b1 CHROMAT_FILE:
MSMg01no128_p16.b1 PHD_FILE: MSMg01no128_p16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:15 2005
         (539 letters)



>mm_chr11_111002260_111003198
          Length = 939

 Score = 1013 bits (524), Expect = 0.0
 Identities = 533/536 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctctgtgtagcccacgataaccttgaacttctgagtttgtgattctgctgcctc 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ggaattctctgtgtagcccacgataaccttgaacttctgagtttgtgattctgctgcctc 686

                                                                       
Query: 64  cacttcacaagtgtagggattcaaaaagtaccatactcagcttatgcagtcataagtacc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cacttcacaagtgtagggattcaaaaagtaccatactcagcttatgcagtcataagtacc 626

                                                                       
Query: 124 gaatgtcatgtgtgctagacaagtactctaacaactgagctacagactcagctctttcca 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gaatgtcatgtgtgctagacaagtactctaacaactgagctacagactcagctctttcca 566

                                                                       
Query: 184 ctgctttctttaacctatcaaattagttgctgttatcagcctttgatatggacatttatt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctgctttctttaacctatcaaattagttgctgttatcagcctttgatatggacatttatt 506

                                                                       
Query: 244 taaatttaccgacactttaacaacttcattgctcaacatgaccttttcttggttaattct 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taaatttaccgacactttaacaacttcattgctcaacatgaccttttcttggttaattct 446

                                                                       
Query: 304 gctcagggatgcagtttcttcctaattagtctttctactcaaaatgtggtagttgtttta 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gctcagggatgcagtttcttcctaattagtctttctactcaaaatgtggtagttgtttta 386

                                                                       
Query: 364 acagcttgccgcttgctggaactgttaaatctcctacacctattaaattagaatctgcac 423
           ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acagcttggggcttgctggaactgttaaatctcctacacctattaaattagaatctgcac 326

                                                                       
Query: 424 atttatgagatcactacgtgacttataaatgcattaaagcccacgcagttctcagcgtga 483
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 325 atttatgagatcactacgtgacttagaaatgcattaaagcccacgcagttctcagcgtga 266

                                                                   
Query: 484 catgagatgctgtgtacccaacactaaccaaataatctctttcttgctggttctgg 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 catgagatgctgtgtacccaacactaaccaaataatctctttcttgctggttctgg 210


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 939
Length adjustment: 10
Effective length of query: 529
Effective length of database: 929
Effective search space:   491441
Effective search space used:   491441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no128_p16.g1 MSMg01no128_p16.g1 CHROMAT_FILE:
MSMg01no128_p16.g1 PHD_FILE: MSMg01no128_p16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:15 2005
         (560 letters)



>mm_chr11_110861818_110862777
          Length = 960

 Score = 1067 bits (552), Expect = 0.0
 Identities = 558/560 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccttcaagtctagaagagtgaaactatgagggattttttaaaattaattacttaattaat 60
           ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 201 ccttcaagtctagaagagtgaaactatgagggatttttttaaattaattaattaattaat 260

                                                                       
Query: 61  tagttaatcagttaatttatttatttatagttacttataggaacatgggagactcaaaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagttaatcagttaatttatttatttatagttacttataggaacatgggagactcaaaag 320

                                                                       
Query: 121 gcagctatactacttagaggtaccttgaacaattgatgggcagctcctccaccaagaaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcagctatactacttagaggtaccttgaacaattgatgggcagctcctccaccaagaaag 380

                                                                       
Query: 181 cccacctccatcaattgccacattatcaacaggcatcactggaacccgaagaaggaaaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccacctccatcaattgccacattatcaacaggcatcactggaacccgaagaaggaaaga 440

                                                                       
Query: 241 ggccggtgcaaatcccatgagccttcctgctccttctgtagggagtgtcaataaccatga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggccggtgcaaatcccatgagccttcctgctccttctgtagggagtgtcaataaccatga 500

                                                                       
Query: 301 tcttaagaggttttttttgtgggtgctgacagccactcagccccaagatagtgatgggca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcttaagaggttttttttgtgggtgctgacagccactcagccccaagatagtgatgggca 560

                                                                       
Query: 361 tctccaacctagaaaaaaaagctcttttactataatgcttgataaagattttaaatacaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctccaacctagaaaaaaaagctcttttactataatgcttgataaagattttaaatacaa 620

                                                                       
Query: 421 gcgtgtatatcttcaatagtttctccttcactaattcttgtattatttccattttaaagt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcgtgtatatcttcaatagtttctccttcactaattcttgtattatttccattttaaagt 680

                                                                       
Query: 481 gacagagacctgtcttaaaaaaacccaagagtgccaatagacctttatgtataaaatatc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gacagagacctgtcttaaaaaaacccaagagtgccaatagacctttatgtataaaatatc 740

                               
Query: 541 tctacttaaacaacttttca 560
           ||||||||||||||||||||
Sbjct: 741 tctacttaaacaacttttca 760


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 960
Length adjustment: 10
Effective length of query: 550
Effective length of database: 950
Effective search space:   522500
Effective search space used:   522500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)