Query= MSMg01no135_c13.b1 MSMg01no135_c13.b1 CHROMAT_FILE:
MSMg01no135_c13.b1 PHD_FILE: MSMg01no135_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:13 2005
(663 letters)
>mm_chr11_38132682_38133749
Length = 1068
Score = 1245 bits (644), Expect = 0.0
Identities = 657/664 (98%), Gaps = 5/664 (0%)
Strand = Plus / Minus
Query: 5 gaattccttatatcttagaagccattaacattttgaagttgcagaatcctgaggtcagca 64
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 gaattccttacattttagaagccattaacattttgaagttgcagaatcctgaggtcagca 809
Query: 65 gcaagaaggctaaatggtccccaagaggaagtcagcacatgtccccaaaagtaaatttct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 gcaagaaggctaaatggtccccaagaggaagtcagcacatgtccccaaaagtaaatttct 749
Query: 125 tatccccttatcacaagaagcagcctattaagtagttgtggtagtaaattttaaattccc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 tatccccttatcacaagaagcagcctattaagtagttgtggtagtaaattttaaattccc 689
Query: 185 ctgaagaaaaggtcgacaaaattgaattatgaagaagaggaaagaagattaaattaccag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 ctgaagaaaaggtcgacaaaattgaattatgaagaagaggaaagaagattaaattaccag 629
Query: 245 aataagagcaaagtcttgagagtaacttcatagcaagcttcaggcccaggaagttttatt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 aataagagcaaagtcttgagagtaacttcatagcaagcttcaggcccaggaagttttatt 569
Query: 305 aagtaggaagtgggggaggatacagtaagataccgttgctgaatttgcaaatgtttgggg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 aagtaggaagtgggggaggatacagtaagataccgttgctgaatttgcaaatgtttgggg 509
Query: 365 ttatctgtgtgtaatgtcagaagagtgtaaaagaggatagagggaatttgtaaaattttg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ttatctgtgtgtaatgtcagaagagtgtaaaagaggatagagggaatttgtaaaattttg 449
Query: 425 acatcagggagtttaagtccagcatatccctagtagtagagtcacgtgacaatgggaagc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 acatcagggagtttaagtccagcatatccctagtagtagagtcacgtgacaatgggaagc 389
Query: 485 cacctttcctctctgaaatgagaaaactgactcacaaaggagttagttaagatattaaga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 cacctttcctctctgaaatgagaaaactgactcacaaaggagttagttaagatattaaga 329
Query: 545 acatcacttcagattttagaggatgaaatatttatagatcctacacatattaagcataaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 acatcacttcagattttagaggatgaaatatttatagatcctacacatattaagcataaa 269
Query: 605 atcttaatttgcaacccttctga-----tttttttttgtaacaacctatttgaacatttc 659
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 268 atcttaatttgcaacccttctgattttttttttttttgtaacaacctatttgaacatttc 209
Query: 660 tggg 663
||||
Sbjct: 208 tggg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1068
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1058
Effective search space: 690874
Effective search space used: 690874
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no135_c13.g1 MSMg01no135_c13.g1 CHROMAT_FILE:
MSMg01no135_c13.g1 PHD_FILE: MSMg01no135_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:13 2005
(632 letters)
>mm_chr11_37968814_37969846
Length = 1033
Score = 1199 bits (620), Expect = 0.0
Identities = 629/632 (99%), Gaps = 1/632 (0%)
Strand = Plus / Plus
Query: 1 tttattaagcctt-ggttgttcagaacctaagagctaggttaagggcagaatggggattg 59
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttattaagcctttggttgttcagaacctaagagctaggttaagggcagaatggggattg 260
Query: 60 gatcctttatcagagaaattaaatacttagaattaactcagattattatgtgagttgtat 119
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatccttcatcagagaaattaaatacttagaattaactcagattattatgtgagttgtat 320
Query: 120 tattttaaagttatgtatttgggtcccatccaggaaaataagtattctaatttccagtct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattttaaagttatgtatttgggtcccatccaggaaaataagtattctaatttccagtct 380
Query: 180 gtgaaataaatccttgtctttggtaattactgccttttgtttacatcatttgctcatgtg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgaaataaatccttgtctttggtaattactgccttttgtttacatcatttgctcatgtg 440
Query: 240 tgtgtctacatgtgtaagaagagaggatgaacaacactgagagagagaatgtcataacta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgtctacatgtgtaagaagagaggatgaacaacactgagagagagaatgtcataacta 500
Query: 300 atgtatagaaggaattctattcatgtgaactcggcaatgctgtgtcatgtcaggagcatg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgtatagaaggaattctattcatgtgaactcggcaatgctgtgtcatgtcaggagcatg 560
Query: 360 tccacaaatagcttcaagttgatagggagtacttgaattgcaagtggcttcaccattctg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccacaaatagcttcaagttgatagggagtacttgaattgcaagtggcttcaccattctg 620
Query: 420 acagaagtcccccagagcaaagcaagtaatggcagtgtgctgcacaagacatgggaggac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acagaagtcccccagagcaaagcaagtaatggcagtgtgctgcacaagacatgggaggac 680
Query: 480 ttgagagtccttggcaaagaaggagcaggggtacgcacatgcacactcagcctttaccca 539
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 681 ttgagagtccttggcaaagaaggagcaggggtgcgcacatgcacactcagcctttaccca 740
Query: 540 gagccccagcactttatcaacctaaacttcatacagaggactcctgaccctggagccttt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gagccccagcactttatcaacctaaacttcatacagaggactcctgaccctggagccttt 800
Query: 600 accaaatagaaaccattgagtttagttcccct 631
||||||||||||||||||||||||||||||||
Sbjct: 801 accaaatagaaaccattgagtttagttcccct 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1033
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1023
Effective search space: 636306
Effective search space used: 636306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
