Query= MSMg01no136_p22.b1 MSMg01no136_p22.b1 CHROMAT_FILE:
MSMg01no136_p22.b1 PHD_FILE: MSMg01no136_p22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:32 2005
(635 letters)
>mm_chr11_33844397_33845431
Length = 1035
Score = 1220 bits (631), Expect = 0.0
Identities = 634/635 (99%)
Strand = Plus / Minus
Query: 1 gtaaaaagtgccaggccagggtccagatgaaacccctataccggccagggacagacaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 gtaaaaagtgccaggccagggtccagatgaaacccctataccggccagggacagacaaca 776
Query: 61 tctgcggtacaggtgataggaacgttcactgacttcacaagggacttataaagaggaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 tctgcggtacaggtgataggaacgttcactgacttcacaagggacttataaagaggaagg 716
Query: 121 acagaatccacattggctgatatctttactttccttctgttgggaaatataaaactgtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 acagaatccacattggctgatatctttactttccttctgttgggaaatataaaactgtca 656
Query: 181 tcattttttaaaatactacagaaaggttaagagacaaagaaacctattccttagacatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tcattttttaaaatactacagaaaggttaagagacaaagaaacctattccttagacatag 596
Query: 241 gactgcatctgtagttggagctctcctctagccccgcccctgcgtgtttggagctctcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gactgcatctgtagttggagctctcctctagccccgcccctgcgtgtttggagctctcct 536
Query: 301 ctagccccgcccctgtgtagttggagctctagtcacgccccttcttttgcgcttctgttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 535 ctagccccgcccctgtgtagttggagctctagtcacgccccttcttttgcgtttctgttg 476
Query: 361 ttttcaatgatcctttttggttttcttgattgaaagacggcacaggtgccatcttctttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ttttcaatgatcctttttggttttcttgattgaaagacggcacaggtgccatcttctttg 416
Query: 421 accatctggcaaatggaggccagatgagctcttgagggatgtctcagctgacgtgtaaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 accatctggcaaatggaggccagatgagctcttgagggatgtctcagctgacgtgtaaca 356
Query: 481 gagccaagttgcatgactttaagaccagcgccttcagtaatgacccttagctatggggca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gagccaagttgcatgactttaagaccagcgccttcagtaatgacccttagctatggggca 296
Query: 541 ggcattttgcatatacaggacaaggcccattctggaaagtaacttatccagggtcttgca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ggcattttgcatatacaggacaaggcccattctggaaagtaacttatccagggtcttgca 236
Query: 601 ataggaaggcaggaaatgggataccagctggtctg 635
|||||||||||||||||||||||||||||||||||
Sbjct: 235 ataggaaggcaggaaatgggataccagctggtctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_p22.g1 MSMg01no136_p22.g1 CHROMAT_FILE:
MSMg01no136_p22.g1 PHD_FILE: MSMg01no136_p22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:32 2005
(593 letters)
>mm_chr11_33684673_33685665
Length = 993
Score = 1071 bits (554), Expect = 0.0
Identities = 584/594 (98%), Gaps = 1/594 (0%)
Strand = Plus / Plus
Query: 1 attgtttccccctggtagcaaagcacccacagatttatccaaacttcagcccaaacagaa 60
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 200 attgtttccccctggtagcaaaccacccacagatttatccaaacttcagcccaaacagca 259
Query: 61 tcatctcaagccacatctgctccagatgttctccattcaattaggactgtctaatttagt 120
||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 260 tcatctcaagccacatctgctccagatgttctcaacccaattaggactgtctaatttagt 319
Query: 121 gattaactgctacacttccttgtgaccctttttt-cctcctgacttccaattggatattt 179
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 320 gattaactgctacacttccttgtgaccctttttttcctcctgacttccaattggatattt 379
Query: 180 gccctgacctctgacctaatggctttcctgtatccctcctctcaaatcttctttgtgttg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gccctgacctctgacctaatggctttcctgtatccctcctctcaaatcttctttgtgttg 439
Query: 240 atgttagttggttttggtttttggtttttcaccattgcagtgagccaagcctggaaccat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atgttagttggttttggtttttggtttttcaccattgcagtgagccaagcctggaaccat 499
Query: 300 gtaaactaggttgggctcaaaatcctcctgctgtatcagccccccaggtgctaagatgga 359
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 500 gtaaactaggttgggctcaaaatcctcctgctgtatcagcctcccaggtgctaagacgga 559
Query: 360 agctgaacaccagtctccattcatccctaaatgagggctgctacacagtgacacgggaca 419
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 560 agctgaacaccagtctccattcatccctaaatgagggctgctacacagtgatacgggaca 619
Query: 420 ctttgcattttattaattaattagttaggctattcctggtgggttgttagcaacatctca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctttgcattttattaattaattagttaggctattcctggtgggttgttagcaacatctca 679
Query: 480 ggaacctaggcagtaggtatgaatgtcaagtgacatgctagccacgacaatgaatgcatc 539
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 680 ggaacctaggcagtaggtatgaatgtcaagtaacatgctagccacgacaatgaatgcatc 739
Query: 540 tccagatatgaccacattgtaagcacagaaagtgtgactagatcccgttctcag 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tccagatatgaccacattgtaagcacagaaagtgtgactagatcccgttctcag 793
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space: 573089
Effective search space used: 573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
