Query= MSMg01no137_f02.b1 MSMg01no137_f02.b1 CHROMAT_FILE:
MSMg01no137_f02.b1 PHD_FILE: MSMg01no137_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:58 2005
(431 letters)
>mm_chr11_23963779_23964609
Length = 831
Score = 810 bits (419), Expect = 0.0
Identities = 425/427 (99%)
Strand = Plus / Minus
Query: 5 ctgcatctcgtttccatactcagatcttaacagtcagagcgaggcagagaactgaggaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ctgcatctcgtttccatactcagatcttaacagtcagagcgaggcagagaactgaggaaa 572
Query: 65 ttaccccatcatttcagcaatgagcctgcttttatcacccaggaattttgtagcctgtct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ttaccccatcatttcagcaatgagcctgcttttatcacccaggaattttgtagcctgtct 512
Query: 125 tctgagctctggacctcagagccatggagaaagaaaaagaaagaaactgctggccactca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 tctgagctctggacctcagagccatggagaaagaaaaagaaagaaactgctggccactca 452
Query: 185 ctaccaggcagctaatcagaaatagatcttggtattaaaatatcccatcagttccctaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ctaccaggcagctaatcagaaatagatcttggtattaaaatatcccatcagttccctaca 392
Query: 245 caaaatataacaagcgtccatgactatatgcggtgaaaggacctgttcattctgggcctt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 caaaatataacaagcgtccatgactatatgcggtgaaaggacctgttcattctgggcctt 332
Query: 305 actactataaaggtgaattgttaggcaggcagtgtacagagctcagtcggaatggatgcc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 actactataaaggtgaattgttaggcaggcagtgtacagagctcagtcggaatggatgcc 272
Query: 365 ccgcttacagaaccccaacaatatgtctgccatgcaccttctaggccctcactacaacca 424
| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 cggcttacagaaccctaacaatatgtctgccatgcaccttctaggccctcactacaacca 212
Query: 425 tccaatc 431
|||||||
Sbjct: 211 tccaatc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space: 346884
Effective search space used: 346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no137_f02.g1 MSMg01no137_f02.g1 CHROMAT_FILE:
MSMg01no137_f02.g1 PHD_FILE: MSMg01no137_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:58 2005
(622 letters)
>mm_chr11_23873459_23874481
Length = 1023
Score = 1166 bits (603), Expect = 0.0
Identities = 618/623 (99%), Gaps = 1/623 (0%)
Strand = Plus / Plus
Query: 1 tgcacactcagttccagtgcaacccttcccccggatctaaccttgggtggtttgatgatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcacactcagttccagtgcaacccttcccccggatctaaccttgggtggtttgatgatt 260
Query: 61 gatgagcactgcctcatctactttctgcaggaatttaaatatatctgcttttgataggta 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 gatgagcactgcctcatctactttctgcaggaatttaaatatatccgcttttgataggta 320
Query: 121 attgcccatggtttagtttatataaaataggttttccaacagaaggggggcactcaactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attgcccatggtttagtttatataaaataggttttccaacagaaggggggcactcaactg 380
Query: 181 tagataaaagcaattaaatggtcattaaatttgggtggctcagcgataaaaatacaagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagataaaagcaattaaatggtcattaaatttgggtggctcagcgataaaaatacaagta 440
Query: 241 agaaagggacaagatggaaccttaaaaaggaaatcattcttgtaggaatacttgctgctc 300
||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 441 agaaagggacaagatggaaccttgaaaaggaaatcattcttgtaggaatgcttgctgctc 500
Query: 301 ctctggcaatcctgcctttgtgacgatgcagggcaccttcaatcccccctttgtgatgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctctggcaatcctgcctttgtgacgatgcagggcaccttcaatcccccctttgtgatgat 560
Query: 361 gcagggtaccttcaatcccacctttgtgatgatgcaggtacctttaactctggttgacat 420
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 561 gcagggtaccttcaatcccacctttgtgatgatgcaggtaccttcaactctggttgacat 620
Query: 421 cttctggcaagcatcagggccacttctagtccctccaattacatacagtcctttgcagtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttctggcaagcatcagggccacttctagtccctccaattacatacagtcctttgcagtc 680
Query: 481 tcttcaagcagacaactcaattatcacgtagtatctactttctagattcccttttttttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcttcaagcagacaactcaattatcacgtagtatctactttctagattcccttttttttt 740
Query: 541 -aacatccctcttgcactttcatgacctcttctgttgcttctgcttcataaattaaagct 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 taacatccctcttgcactttcatgacctcttctgttgcttctgcttcataaattaaagct 800
Query: 600 ttttagtgtcattcttgtgggga 622
|||||||||||||||||||||||
Sbjct: 801 ttttagtgtcattcttgtgggga 823
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1023
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1013
Effective search space: 619956
Effective search space used: 619956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
