TCGTCTNNNTCTCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXTCCGAG
AATCCGCGGAATTCGACTTGTCCTCTCATCAGGGGAAAACACCTTTAACT
CCATCGGGTTGACAAATACCCAACAGTGCCTCAAAGCAAAAAAGAATTAA
AGCTGTAGTCCTGTTAAGGAGGAACTAGGGACCCTTTACTGGCATCCCGC
AGACGCAGAAAAGGCTCCAAGCTCTTCTTCACATGGCAGCTACCAGCCAT
CTAATAGTCTGGCCTCCTCTATCACCTCTCCCTTCCTTTTGATCCTTGAG
TGCCATTGAACAGCTTGATGTTCTATCTATAAAAAGATTGTCTCTCTGGA
CTCCACTAACATGGTCCCTCTACCAACAATACCATGCTTGCTTCTCATTC
CGCCAAGCCAATAACTTCTCACTCAAACTCAACCTCTTATGTTAAACTTA
AGAATCAGCTCTAACCAGAAGCAATCCTATTCATTTCCTATACTCGATCT
CAGAGAGACAGGCGTTAGAGTCTCAACTCAGGCTTCCTAAGCCCTTGGGG
GCAATCTTGTCCATCAACTCATTCTAAATCCATTTCCTTTCTTGTTTCTA
TGGAGCTTGATAGAAAGCGGGAGGTACCGTCATCACCCGAAGGGTCAACA
AATCAAGCACAAAATAACCACATTAAAAAGATCTCTTTCAGTGTTTATTA
CT

ACTCTTNTTCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACGAA
TGGCAGAGAAGCACCTGAAAAAAATGTTCAACATCCATAATCATCAGGGA
AATGCAAATCAAAACAACCCTGAGATTCCACCTCACAACAGTCAGAATGG
CTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGCATGTGGAGAA
AGGGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACT
CTGGAAATCAGTCTGGTGGTTTTCAGAAAATTGGACATAGTACTTCCGGA
GGATCCTGCAATACATCTCCTGGGCATATATCCAGAAGATGTTCCATCTG
GTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATA
GCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACA
GAAAATGTGGTAAATTTACACAATGGATTACTACTCAGCTATTAAAAAGA
ATGAATTTATGAAATTCCTAGGTAAATGGATGGACGTGGAGGGCATCATC
CTGAGTGAGGTAACCCAATCACAAAGGAACTCACACAATATGTACTCAGT
GATAAGTGGATATTAGCCCAGAAACTTAGGATACCCAAGATATAAGATAC
AA

Query= MSMg01no138_j24.b1 MSMg01no138_j24.b1 CHROMAT_FILE:
MSMg01no138_j24.b1 PHD_FILE: MSMg01no138_j24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:43 2005
         (601 letters)



>mm_chr11_25989108_25990108
          Length = 1001

 Score = 1127 bits (583), Expect = 0.0
 Identities = 595/599 (99%)
 Strand = Plus / Plus

                                                                       
Query: 3   gaattcgacttgtcctctcatcaggggaaaacacctttaactccatcgggttgacaaata 62
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattcgacttgtccactcatcaggggaaaacacctttaactccatcgggttgacaaata 262

                                                                       
Query: 63  cccaacagtgcctcaaagcaaaaaagaattaaagctgtagtcctgttaaggaggaactag 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cccaacagtgcctcaaagcaaaaaagaattaaagctgtagtcctgttaaggaggaactag 322

                                                                       
Query: 123 ggaccctttactggcatcccgcagacgcagaaaaggctccaagctcttcttcacatggca 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggaccctttactggcatcccgcagacgcagaaaaggctccaagctcttcttcacatggca 382

                                                                       
Query: 183 gctaccagccatctaatagtctggcctcctctatcacctctcccttccttttgatccttg 242
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gcaaccagccatctaatagtctggcctcctctatcacctctcccttccttttgatccttg 442

                                                                       
Query: 243 agtgccattgaacagcttgatgttctatctataaaaagattgtctctctggactccacta 302
           |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 443 agtgccattgaacagcttgatgttctgtctataaacagattgtctctctggactccacta 502

                                                                       
Query: 303 acatggtccctctaccaacaataccatgcttgcttctcattccgccaagccaataacttc 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 acatggtccctctaccaacaataccatgcttgcttctcattccgccaagccaataacttc 562

                                                                       
Query: 363 tcactcaaactcaacctcttatgttaaacttaagaatcagctctaaccagaagcaatcct 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tcactcaaactcaacctcttatgttaaacttaagaatcagctctaaccagaagcaatcct 622

                                                                       
Query: 423 attcatttcctatactcgatctcagagagacaggcgttagagtctcaactcaggcttcct 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 attcatttcctatactcgatctcagagagacaggcgttagagtctcaactcaggcttcct 682

                                                                       
Query: 483 aagcccttgggggcaatcttgtccatcaactcattctaaatccatttcctttcttgtttc 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aagcccttgggggcaatcttgtccatcaactcattctaaatccatttcctttcttgtttc 742

                                                                      
Query: 543 tatggagcttgatagaaagcgggaggtaccgtcatcacccgaagggtcaacaaatcaag 601
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tatggagcttgatagaaagcgggaggtaccgtcatcacccgaagggtcaacaaatcaag 801


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space:   585681
Effective search space used:   585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)