Query= MSMg01no139_i14.b1 MSMg01no139_i14.b1 CHROMAT_FILE:
MSMg01no139_i14.b1 PHD_FILE: MSMg01no139_i14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:58 2005
(566 letters)
>mm_chr11_63784574_63785539
Length = 966
Score = 1052 bits (544), Expect = 0.0
Identities = 556/560 (99%)
Strand = Plus / Plus
Query: 7 gaattctgtcttcgtgaatttgaggagtgtggttcctggactaggggcactagcagcacc 66
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctgtctttgtgaatttgaggagtgtggttcctggactaggggcactagcagcacc 266
Query: 67 cgggaacttgctgacgtgacattcttagacactaccagagccacaggaaagcccagtaag 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cgggaacttgctgacgtgacattcttagacactaccagagccacaggaaagcccagtaag 326
Query: 127 cactctgggaaaaacgggtgggctctgagcctgtgaatcagtgctttccacactgaaagt 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 cactctgggaaaaacgggtgggctctgagcctgtgaatcagtgctttccacactgaaagt 386
Query: 187 actgttaaagggcgggcgcacacaccaagaagtggagagagcattagaaagagtctttgc 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 actgttaaagggcgggcgcacacaccaagaagtggagagagcattagaaagagtctttgc 446
Query: 247 ttttaggtggtgctttctgaatgaactttctatggccaggaacctgatctgacagacact 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttttaggtggtgctttctgaatgaactttctatggccaggaacctgatctgacagacact 506
Query: 307 gatgctaagtaaaggtacaccgtagtccacaattcagaccgtagttagtctgcccagtca 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gatgctaagtaaaggtacaccgtagtccacaattcagaccgtagttagtctgcccagtca 566
Query: 367 ccgcggaccctgaacaggcagtacacagggcagcaggcatatggcagaggcgttgctcac 426
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ctgtggaccctgaacaggcagtacacagggcagcaggcatatggcagaggcgttgctcac 626
Query: 427 tgaggccctgggcctcgcaagggcgtgtttccaatgacctattttatctaaccccgctca 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tgaggccctgggcctcgcaagggcgtgtttccaatgacctattttatctaaccccgctca 686
Query: 487 attttcaaaggttttgctctgtgctgccaggatggcagctacgaaccaaatgtggttctg 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 687 attttcaaaggttttgctctgtgctgccaggatggcagctacgaaccaaatgtggctctg 746
Query: 547 gacacttgaatgatggctag 566
||||||||||||||||||||
Sbjct: 747 gacacttgaatgatggctag 766
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 966
Length adjustment: 10
Effective length of query: 556
Effective length of database: 956
Effective search space: 531536
Effective search space used: 531536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no139_i14.g1 MSMg01no139_i14.g1 CHROMAT_FILE:
MSMg01no139_i14.g1 PHD_FILE: MSMg01no139_i14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:58 2005
(485 letters)
>mm_chr11_63952832_63953716
Length = 885
Score = 783 bits (405), Expect = 0.0
Identities = 426/433 (98%), Gaps = 1/433 (0%)
Strand = Plus / Minus
Query: 1 caggtgctgaaagttgtaatttggccaagagattatgtaccttcctcaagaagggtgaaa 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 432 caggtgctgaaagttgtaatttggccaagaaattatgtaccttcctcaagaagggtgaaa 373
Query: 61 gtggaggttgtacaggactacatgtactggggcatgtaggcgtggaacagggaaagagcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gtggaggttgtacaggactacatgtactggggcatgtaggcgtggaacagggaaagagcg 313
Query: 121 atccttacactggccagtctcaagatgagatttctggggttttagacttctctcagctcc 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 atccttactctggccagtctcaagatgagatttctggggttttagacttctctcagctcc 253
Query: 181 actcttgctccagatcagctcccctggttgcatggcttacctgcccacatttcctttctc 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 252 actcttgctccagatcagctcccttggttgcatggcttacctgcccacatttcctttctc 193
Query: 241 ttttacaaaggggagatgtcatcacagccctcagcctctgttttgggaatggtttggcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ttttacaaaggggagatgtcatcacagccctcagcctctgttttgggaatggtttggcac 133
Query: 301 taaaccagagccttattggcagtgttttttttacaatactacttatctgccattttagaa 360
|||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 132 taaaccagagccttattggcagtggtttttt-acaatactacttatctgccattttagaa 74
Query: 361 attggatgaggcagggtgccaggaggaatagggctctgatggacagtacagggccagaga 420
|||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 73 attggatgaggcagagtgccaggaggaatagggctctgatggacagtacggggccagaga 14
Query: 421 tgggaagaaggca 433
|||||||||||||
Sbjct: 13 tgggaagaaggca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space: 415625
Effective search space used: 415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
