Query= MSMg01no141_f03.b1 MSMg01no141_f03.b1 CHROMAT_FILE:
MSMg01no141_f03.b1 PHD_FILE: MSMg01no141_f03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:35 2005
(278 letters)
>mm_chr11_64495954_64496631
Length = 678
Score = 493 bits (255), Expect = e-144
Identities = 272/278 (97%)
Strand = Plus / Minus
Query: 1 aattgcgattggtgtctgtgaggntttgctttatcttagagcttggtcatatgtaactct 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 478 aattgcgattggtgtctgtgaggctttgctttatcttagagcttggtcatatgtaactct 419
Query: 61 gaatgttgaggaaatcagaaccctcctgctcctaactccacaccttgaagagtggattaa 120
|||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 418 gaatgtggaagaaatcagaaccctcctgctcccaactccacaccttgaagagtggattaa 359
Query: 121 acacagaatggagaaaatgcagaacatggaaggaaattataccctacttacagattttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 acacagaatggagaaaatgcagaacatggaaggaaattataccctacttacagattttca 299
Query: 181 aaaaatctgcaatgggcactaattgattaccatgccagaactcttctgcatggtgcccaa 240
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 298 aaaaatctgcaatgggcactaattgaaaaccatgccagaactcttctgcatggtgcccaa 239
Query: 241 aacttttttcaccacttagatggtcccttcctctgtat 278
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 aacttttttcaccacttagatggtcccttcctctgtat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 678
Length adjustment: 9
Effective length of query: 269
Effective length of database: 669
Effective search space: 179961
Effective search space used: 179961
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no141_f03.g1 MSMg01no141_f03.g1 CHROMAT_FILE:
MSMg01no141_f03.g1 PHD_FILE: MSMg01no141_f03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:35 2005
(212 letters)
>mm_chr11_64380889_64381500
Length = 612
Score = 325 bits (168), Expect = 1e-93
Identities = 183/188 (97%), Gaps = 1/188 (0%)
Strand = Plus / Plus
Query: 1 actcaaagaggcaaaatgtttttaataagacccatagcataggagcaaaagacaaatata 60
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 201 actcaaagaggcaaaatgtttttaataagacccagagcataggagcaaaagaaaaatata 260
Query: 61 tcagatgatatcaaactggaaagtgaagagacagataagatcatgaagacacaacttaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcagatgatatcaaactggaaagtgaagagacagataagatcatgaagacacaacttaaa 320
Query: 121 agaaacatgtccaggaacatgaggaaacctgaaaattcaacagcaaatatgtgtgtgtg- 179
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 agaaacatgtccaggaacatgaggaaaactgaaaattcaacagcaaatatgtgtgtgtga 380
Query: 180 tgtgtgtg 187
|| |||||
Sbjct: 381 tgagtgtg 388
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 212
Length of database: 612
Length adjustment: 9
Effective length of query: 203
Effective length of database: 603
Effective search space: 122409
Effective search space used: 122409
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
