ATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCACTTACTAGCGTACTAAATATTCGGTCCAGTCCTTGGAATAGCTC
AAGGCTGCTCTGTGGTGATCTCTCACTCTTCCTGGCAGAATTGCTTTGAA
CTATTTTTAAACGTTTGCATTTTTTTTCTAAAGAAATCTCACAGCATTAA
ACTCAGTATATGGTACCAATACAGTGTGTTCCATATGGTAGTTCAAACAA
CAGGAAAGATAACATTATCCACACTCTATCTCATAAAAATATCTAAATAA
AATAGAACTAACTTACAATGTGCTTTTACTGTGAATATAGGTCGCTTAAA
TCCCTACAGAATAGGGAAAATGAGGCAACATAGAACAAAGAGAAGATCAT
GGACACTTGGATCAAACCCCCCCTACCCCATAGCCATTTGATTTTAAGCA
AAGTATGTCAATTCTATATGCAAGTAGATGTGCATGTCATTTTGCACCGG
AAGTTTTATGTAACTTGCTATCCACTTATTCATACACATGCTGCTTCCAG
GAAATGGGTGAATTCTTTTGAACGAGAAGTAGTATATGAAAAAAGCTATA
AATGTGGAAAATTATCATTCCCCAAGTTGTTACTTACCTTTCTGCTTCCA
AGGACTAATTGAATTTCATATTTCTACATGTGTGACA

CGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCTGAG
AAGCACCTGAAAAAAATTCTCAGCATCCTTAATCATCAGAGAAATGCACA
TCAAAACAACCCTGACATTCCACCTCACACCAGTCAGATTGGCTAAGATC
AAAAATTCAGGTGACAGCAGATGATGGCAAGGATGTGGAGAAAGAGGAAC
ACTCCTCCATTTTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAAT
CAGTCTTCTGGTTCCTCAGAAAATTGGTCATAGTACTACCAGAGGATCCC
GCAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACTGGTAAGAA
GGACACATGCTCCACCACCCCCATAGCAGCCATATTTATAATAGCCAGAA
GCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAAAAAATG
TGGTACATTTACACAATGGAGTACTATTCAGCTATTAAAAAGAATGAATT
TATGAAATTCCTAGGCAAATGGATGGAACTGGAGGGCATCATCCTAAGTG
AGGTAACATAATCACAAAAGAACTCANATGATATGTACTCACTGATAAGT
GGATATTAGCCCAGAAACTTAGTATACTCGAGATATAAG

Query= MSMg01no143_o09.b1 MSMg01no143_o09.b1 CHROMAT_FILE:
MSMg01no143_o09.b1 PHD_FILE: MSMg01no143_o09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:34 2005
         (637 letters)



>mm_chr11_41949329_41950365
          Length = 1037

 Score = 1135 bits (587), Expect = 0.0
 Identities = 621/639 (97%), Gaps = 12/639 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcacttactagcgtactaaatattcggtccagtccttggaatagctcaaggctgct 64
           |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 gaattcacttaccagtgtactaaatattcggtccagtccttggaatagctcaaggctgct 778

                                                                       
Query: 65  ctgtggtgatctctcactcttcctggcagaattgctttgaactatttttaaacgtttgca 124
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 777 ctgtggtgatctctcactcttcctggcagaattgctttgaactatttttaaatgtttgca 718

                                                                       
Query: 125 ttttttttctaaagaaatctcacagcattaaactcagtatatggtaccaatacagtgtgt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 ttttttttctaaagaaatctcacagcattaaactcagtatatggtaccaatacagtgtgt 658

                                                                       
Query: 185 tccatatggtagttcaaacaacaggaaagataacattatccacactctatctcataaaaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 tccatatggtagttcaaacaacaggaaagataacattatccacactctatctcataaaaa 598

                                                                       
Query: 245 tatctaaataaaatagaactaacttacaatgtgcttttactgtgaatataggtcgcttaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 tatctaaataaaatagaactaacttacaatgtgcttttactgtgaatataggtcgcttaa 538

                                                                       
Query: 305 atccctacagaatagggaaaatgaggcaacatagaacaaagagaagatcatggacacttg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 atccctacagaatagggaaaatgaggcaacatagaacaaagagaagatcatggacacttg 478

                                                                       
Query: 365 gatcaaaccccccc------taccccatagccatttgattttaagcaaagtatgtcaatt 418
           |||||||      |      ||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gatcaaa------caagttttaccccatagccatttgattttaagcaaagtatgtcaatt 424

                                                                       
Query: 419 ctatatgcaagtagatgtgcatgtcattttgcaccggaagttttatgtaacttgctatcc 478
           |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 423 ctatatgcaagtagatgtgcatgttattttgcacaggaagttttatgtaacttgctatcc 364

                                                                       
Query: 479 acttattcatacacatgctgcttccaggaaatgggtgaattcttttgaacgagaagtagt 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 acttattcatacacatgctgcttccaggaaatgggtgaattcttttgaacgagaagtagt 304

                                                                       
Query: 539 atatgaaaaaagctataaatgtggaaaattatcattccccaagttgttacttacctttct 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 atatgaaaaaagctataaatgtggaaaattatcattccccaagttgttacttacctttct 244

                                                  
Query: 599 gcttccaaggactaattgaatttcatatttctacatgtg 637
           |||||||||||||||||||||||||||||||| ||||||
Sbjct: 243 gcttccaaggactaattgaatttcatatttctgcatgtg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space:   643929
Effective search space used:   643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)