TCCCCNCCTCTATAATTGCGGCGCTAAACGACTCCTATATCGAGAGATCC
GCGGAATTCATTGAATCTGCATAGATGTGCTAAGAAAAAAAGGAATATGG
ATACAAAGACACAGTTTTTAATATTCTTGACAACAGGAAGAATGCATAAA
AAACACATTAGGGAGGATCTGGTCAGTAATTAAAGAGATGTGTTCATAAA
TAAACAGAGCTGTATAATTGTGTTCAAAGCCAACAGCTCCAAGAATCAAA
GGAGGATGGCTTCATTGAGTCATCAAAGAGAACATGGCCCCATCACCATT
TTCATTCTGGTTTCTAATCTCCAAACCTTGGTCAGAAAACTTAAATCTAC
AGCCTTATGCAACTCAACCTCTGAAATGATGCCAGAGAAACAAAATAAAC
TAATCTATAGATTATAAACTAAACTATACACTATATGATTAATAATTAAA
AAGAATGTGTCATACAGTAAATATGTGCATATAATACATGTGATATATAT
ATGTATATATACATATATATATACACATGTGTATAATACATGTGATACAC
ACACACACACACATATATATATACACATACACATACACATACACATACAC
ATATACATATATTTGGTTTTGGGATAAGGACATTTCAGGTTTAAGTACCN
AAACAAATATCAAGAANATATTATGTAAAGAAATAN

CCCCTCGATGAAGTGGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXGACAAAAAATCTTTGTTTAGCTCTGTACCACATTTTT
AATAGGGTTATTTGATTTTCTGCACACCAGCTTCTTGAGTTCTTTATATA
CATTGGATATTTGTCCCCTATCTGATTTATGATTGATAAAAATACTTTCC
TAATCTGTTGGTGGCCTTTTTTGTTTTATTGACAATATCTTTTGCCTTAC
AGAAGCTTTGCAATTTTATGAGGTCCCATTTGTCAATTCTCGATCTTACA
GCACAAGCCAGTGCTGCTCTGNACTGNATTTTTCCCCTGTGCCCATATAT
TCGAGACTTTTCCCCACTTTCTCCTCTGTAAGTTTCAGAGTCTCTGGTTT
TATGTGAAGTTCCTTGATCCACTTAGACTTGATCTTAGTACAAGGACATA
AGAATGGACCAATTCAAATTCTTCTACATGATAACCACCAGTTGTGCCAA
CACCATTTGTTGAAAATGCTGTTTTTTTTCCACTGGATGGTTTTAGATCC
CCTGTCAAAGATCAAGTGACCATAGGTGTGTGGGTTCATTTCTTGGTCTT
CAATTCTATTTCATTGATAGACCTGTCTGTCTCTGTACCAGAACCATGCA
GTTTTTTTCACATGTGCTCTGTAACAA

Query= MSMg01no145_j01.b1 MSMg01no145_j01.b1 CHROMAT_FILE:
MSMg01no145_j01.b1 PHD_FILE: MSMg01no145_j01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:41 2005
         (603 letters)



>mm_chr11_37425252_37426255
          Length = 1004

 Score = 1021 bits (528), Expect = 0.0
 Identities = 593/646 (91%), Gaps = 51/646 (7%)
 Strand = Plus / Plus

                                                                       
Query: 6   ggaattcattgaatctgcatagatgtgctaagaaaa-aaaggaatatggatacaaagaca 64
           ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 206 ggaattcattgaatctgaatagatgtgctaagaaaacaaaggaatatggatacaaagaca 265

                                                                       
Query: 65  cagtttttaatattcttgacaacaggaagaatgcataaaaaacacattagggaggatctg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cagtttttaatattcttgacaacaggaagaatgcataaaaaacacattagggaggatctg 325

                                                                       
Query: 125 gtcagtaattaaagagatgtgttcataaataaacagagctgtataattgtgttcaaagcc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gtcagtaattaaagagatgtgttcataaataaacagagctgtataattgtgttcaaagcc 385

                                                                       
Query: 185 aacagctccaagaatcaaaggaggatggcttcattgagtcatcaaagagaacatggcccc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aacagctccaagaatcaaaggaggatggcttcattgagtcatcaaagagaacatggcccc 445

                                                                       
Query: 245 atcaccattttcattctggtttctaatctccaaaccttggtcagaaaacttaaatctaca 304
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 446 atcaccattttcattctggtttctaatctccaaaccttggtcagaaaacttaaatccaca 505

                                                                       
Query: 305 gccttatgcaactcaacctctgaaatgatgccagagaaacaaaataaactaatctataga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gccttatgcaactcaacctctgaaatgatgccagagaaacaaaataaactaatctataga 565

                                                                       
Query: 365 ttataaactaaactatacactatatgattaataattaaaaagaatgtgtcatacagtaaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ttataaactaaactatacactatatgattaataattaaaaagaatgtgtcatacagtaaa 625

                                                                       
Query: 425 tatgtgcatataatacatgtgatatatatatgtatatatacatatatatatacacatgtg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 626 tatgtgcatataatacatgtgatatatatatgtatatatacatatatata--cacatgtg 683

                                                                       
Query: 485 tataatacatgtgatacacacacacacaca----------------catatatatata-- 526
           ||||||||||||||||||||||||||||||                ||||||||||||  
Sbjct: 684 tataatacatgtgatacacacacacacacatatatatatacatatacatatatatatata 743

                                                                       
Query: 527 ------------------------------cacatacacatacacatacacatacacata 556
                                         ||||||||||||||||||||||||||||||
Sbjct: 744 cacatacacatacacatacacatacacatacacatacacatacacatacacatacacata 803

                                                         
Query: 557 tacatatatttggttttgggataaggacatttcaggtttaagtacc 602
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tacatatatttggttttgggataaggacatttcaggtttaagtacc 849



 Score = 72.3 bits (37), Expect = 1e-16
 Identities = 43/45 (95%), Gaps = 2/45 (4%)
 Strand = Plus / Minus

                                                        
Query: 439 acatgtgatatatatatgtatatatacatatatatatacacatgt 483
           ||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 682 acatgtg-tatatatatgtatatatacatatatatat-cacatgt 640


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 72
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 2
Length of query: 603
Length of database: 1004
Length adjustment: 10
Effective length of query: 593
Effective length of database: 994
Effective search space:   589442
Effective search space used:   589442
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)