Query= MSMg01no148_b11.b1 MSMg01no148_b11.b1 CHROMAT_FILE:
MSMg01no148_b11.b1 PHD_FILE: MSMg01no148_b11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:52 2005
(523 letters)
>mm_chr11_120449504_120450426
Length = 923
Score = 971 bits (502), Expect = 0.0
Identities = 517/522 (99%), Gaps = 2/522 (0%)
Strand = Plus / Minus
Query: 3 gaattccttacttcttg-ctacggttaagatgcttcagacccaccttctatttccctgcc 61
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 gaattccttacttcttgac-acggttaagatgcttcagacccaccttctatttccctgcc 792
Query: 62 caacctggagccaccatttctccaaggaaccctggctcctttagtggagactaacaacat 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 caacctggagccaccatttctccaaggaaccctggctcctttagtggagactaacaacat 732
Query: 122 ctaggaagcagcatccgatcagtgggtgagcttgtcaattctggtcttgtccagccagag 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 ctaggaagcagcatccgatcagtgggtgagcttgtcaattctggtcttgtccagccagag 672
Query: 182 ctgggacacctggatactaactaatgtgtgtactactgtgtctattctgtagtgtctagc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ctgggacacctggatactaactaatgtgtgtactactgtgtctattctgtagtgtctagc 612
Query: 242 catatctagacatttgagcgactgagttcctactgttatctctgactctcacaccccagg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 catatctagacatttgagcgactgagttcctactgttatctctgactctcacaccccagg 552
Query: 302 ttcccttgcttcctgttgttataaattctcggtgcagaaggttgcctcggacccacatta 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ttcccttgcttcctgttgttataaattctcggtgcagaaggttgcctcggacccacatta 492
Query: 362 ctcacttacacgattcagcatgtagtgtggatccgagctttcagagctgctttctagttt 421
|||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 491 ctcacttagatgattcagcatgtagtgtggacccgagctttcagagctgctttctagttt 432
Query: 422 ccgtaagcaacatctgctaaccagactacagtgtgtcctaagttttgacttttagtgtat 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ccgtaagcaacatctgctaaccagactacagtgtgtcctaagttttgacttttagtgtat 372
Query: 482 taagatgtagtaaaaatattcatttccagagttgtcagggac 523
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 taagatgtagtaaaaatattcatttccagagttgtcagggac 330
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space: 468369
Effective search space used: 468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_b11.g1 MSMg01no148_b11.g1 CHROMAT_FILE:
MSMg01no148_b11.g1 PHD_FILE: MSMg01no148_b11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:53 2005
(617 letters)
>mm_chr11_120289431_120290449
Length = 1019
Score = 1120 bits (579), Expect = 0.0
Identities = 609/619 (98%), Gaps = 2/619 (0%)
Strand = Plus / Plus
Query: 1 attccatagtcaaacctgctcaacagtaactgctggcctagcatgactgctgtataccgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attccatagtcaaacctgctcaacagtaactgctggcctagcatgactgctgtataccgg 260
Query: 61 ccaagcaacacagtcccctgtatgtgagaagtgagcaaggccttagttagagtggtatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaagcaacacagtcccctgtatgtgagaagtgagcaaggccttagttagagtggtatcc 320
Query: 121 agagaatagagggaatccaggcagcctcaggtagggcactgcacatagttcctcctactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagaatagagggaatccaggcagcctcaggtagggcactgcacatagttcctcctactg 380
Query: 181 cctaccttccaccggctggacacttacttgatttttagcaaatggagggatttgctggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctaccttccaccggctggacacttacttgatttttagcaaatggagggatttgctggac 440
Query: 241 gatgctgttatctctccagtcttgtttctattgatgtaaactgagaagccgttgttttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatgctgttatctctccagtcttgtttctattgatgtaaactgagaagccgttgttttgg 500
Query: 301 aagccaaactcctttgcaacctacaagccccaaacaacagaaatataccgaaacatccaa 360
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 aagccaaactcctttgcaacctacaagccccaaacaacagaaatataatgaaacatccaa 560
Query: 361 gcatcacatgccacaggctgccaagaccacaggagga-cacttggtaacgttagggaatg 419
|||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||
Sbjct: 561 gcatcacatgccacaggctgccaagaccacaggaagaacacttggtaacgttaggaaatg 620
Query: 420 ctcagcacaaggatgcatctctt-gtcatttcacttgagaaaaactgtattgatcatacc 478
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctcagcacaaggatgcatccctttgtcatttcacttgagaaaaactgtattgatcatacc 680
Query: 479 aatgccaattcagtaagtggtccaaaggaagccaaggttctatataaataataaaaagtt 538
|||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 681 aatgccaattcaataagtggtccaaaagaagccaaggttctatataaataataaaaagtt 740
Query: 539 gaaactagccagagtcaaggccattgtggtaagttaattgctgctttagaaacactagtg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaaactagccagagtcaaggccattgtggtaagttaattgctgctttagaaacactagtg 800
Query: 599 agaacccaaatccaatcat 617
||||||||| |||||||||
Sbjct: 801 agaacccaattccaatcat 819
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1019
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1009
Effective search space: 612463
Effective search space used: 612463
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
