Query= MSMg01no148_p11.b1 MSMg01no148_p11.b1 CHROMAT_FILE:
MSMg01no148_p11.b1 PHD_FILE: MSMg01no148_p11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:03 2005
(599 letters)
>mm_chr11_32778898_32779896
Length = 999
Score = 630 bits (326), Expect = 0.0
Identities = 374/394 (94%), Gaps = 11/394 (2%)
Strand = Plus / Minus
Query: 212 tgacttaaaggaaagtatcactacaatgatagaacagatg----attttttacagctcag 267
|||||||||||||||||||||||||||||||||||||||| | ||||| |||||
Sbjct: 999 tgacttaaaggaaagtatcactacaatgatagaacagatgaagaa----ttacaactcag 944
Query: 268 aaactgaaacaattcacaaagaagaaaaagaaaacccagacattttataaccaa-ggcta 326
|||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 943 aaaccaaaaaaattcacaaagaagaaaaagaaaacccagacattttataaccaagggcta 884
Query: 327 caatgtatgaaatgaaattttcaatggatagacttaacagagacatagatgaaacagaaa 386
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 883 caatgtatgaaatgaaattttcaatggatagacttaacagagacatagataaaacagaaa 824
Query: 387 gtatcaatttgcttcaaaacaggtaattatctgtgtaaagagatgaaaatttagagtgta 446
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 823 gtatcaattcgcttcaaaacaggtaattatctctgtaaagagatgaaaatttagagtgta 764
Query: 447 caaatgcatcacgtggaccctgtatgtctgcctggcggtttagtgaaaatcaaaagaaaa 506
|||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 763 caaatgcatcacatggaccctgtatgtctgcctggtggtttagtgaaaatcaaaagaaaa 704
Query: 507 acacatcaaaacccagtcaggataattccaaggaattacttccaggcacatcaacgtcaa 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 acacatcaaaacccagtcaggataattccaaggaattacttccaggcacatcaacgtcaa 644
Query: 567 agtactgcaaaacc-aaagataaaaagaagtatt 599
||||||| |||||| |||||||||||||||||||
Sbjct: 643 agtactg-aaaacccaaagataaaaagaagtatt 611
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_p11.g1 MSMg01no148_p11.g1 CHROMAT_FILE:
MSMg01no148_p11.g1 PHD_FILE: MSMg01no148_p11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:03 2005
(157 letters)
>mm_chr11_32701570_32702126
Length = 557
Score = 292 bits (151), Expect = 7e-84
Identities = 154/155 (99%)
Strand = Plus / Plus
Query: 1 aactttgtcttcagtcaaagaagaggaaatggttcgtaagacgcaaaggtcatcttgcgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aactttgtcttcagtcaaagaagaggaaatggttcgtaagacgcaaaggtcatcttgcgg 260
Query: 61 ggtggaagggccgctctgcacactcctgtgtgtttacagaacacccacagctagttcatg 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtggaagggccgctccgcacactcctgtgtgtttacagaacacccacagctagttcatg 320
Query: 121 aacaggaaggagatggggtgagagtgggggtgggg 155
|||||||||||||||||||||||||||||||||||
Sbjct: 321 aacaggaaggagatggggtgagagtgggggtgggg 355
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 157
Length of database: 557
Length adjustment: 8
Effective length of query: 149
Effective length of database: 549
Effective search space: 81801
Effective search space used: 81801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
