Query= MSMg01no149_b07.b1 MSMg01no149_b07.b1 CHROMAT_FILE:
MSMg01no149_b07.b1 PHD_FILE: MSMg01no149_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:12 2005
(586 letters)
>mm_chr11_66238188_66239174
Length = 987
Score = 1096 bits (567), Expect = 0.0
Identities = 579/583 (99%), Gaps = 1/583 (0%)
Strand = Plus / Minus
Query: 5 gaattcctagtataacgtgtgtctctagcttcttatgcaaaggccaaatgtccctggaaa 64
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 gaatttctagtataatgtgtgtctctagcttcttatgcaaaggccaaatgtccctggaaa 728
Query: 65 tagaaacatgtcctcattctcacataccaccctagcatgccagcctacccttgatccagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 tagaaacatgtcctcattctcacataccaccctagcatgccagcctacccttgatccagg 668
Query: 125 ctaggaacccccccaaagggaaatgagagactggggggcaaaccaagacccaaatgtgga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 ctaggaacccccccaaagggaaatgagagactggggggcaaaccaagacccaaatgtgga 608
Query: 185 gcagaatatctgggctctgtgctttggtttctcaggctgaaggggcagcaggggactggc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gcagaatatctgggctctgtgctttggtttctcaggctgaaggggcagcaggggactggc 548
Query: 245 aggtggaactgcaggccaagctgcagaaacaggacagtgccaatacttttctaggactgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 aggtggaactgcaggccaagctgcagaaacaggacagtgccaatacttttctaggactgt 488
Query: 305 aactgataaactgggacatccacaatatttcctaagcaaactaggttaccctccccgctg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 aactgataaactgggacatccacaatatttcctaagcaaactaggttaccctccccgctg 428
Query: 365 ctgcagctacccgagggcattgggcagctgggtgacccagaaatggtcatcttcttgtcc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ctgcagctacccgagggcattgggcagctgggtgacccagaaatggtcatcttcttgtcc 368
Query: 425 agctccatctggaattctagcccccaattccctagtactgacagctctaggtggaaggaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 agctccatctggaattctagcccccaattccctagtactgacagctctaggtggaaggaa 308
Query: 485 gcttgacaacatcaaatggaatcaagtccattcttatttcaggaagcttatcccaaacaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gcttgacaacatcaaatggaatcaagtccattcttatttcaggaagcttatcccaaacaa 248
Query: 545 taaagagggagaggcataggctgtcctttta-aaaaaaaaggc 586
|||||||||||||||||||||||||||||| |||||||||||
Sbjct: 247 taaagagggagaggcataggctgtccttttttaaaaaaaaggc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 987
Length adjustment: 10
Effective length of query: 576
Effective length of database: 977
Effective search space: 562752
Effective search space used: 562752
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no149_b07.g1 MSMg01no149_b07.g1 CHROMAT_FILE:
MSMg01no149_b07.g1 PHD_FILE: MSMg01no149_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:13 2005
(556 letters)
>mm_chr11_66141393_66142349
Length = 957
Score = 1062 bits (549), Expect = 0.0
Identities = 555/557 (99%), Gaps = 1/557 (0%)
Strand = Plus / Plus
Query: 1 agagtgaaatagtgtgaccattaagtgatgctggcagtctctatttttttctcattattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagtgaaatagtgtgaccattaagtgatgctggcagtctctatttttttctcattattc 260
Query: 61 tgcccagttgtgtgtagaaataagagttggtcagtctgcacacacttagatgctattctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcccagttgtgtgtagaaataagagttggtcagtctgcacacacttagatgctattctc 320
Query: 121 ccagcctgccataatagtatgatattgattgacgaggccaccccatctccttgatcc-at 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 ccagcctgccataatagtatgatattgattgacgaggccaccccatctccttgatcccat 380
Query: 180 gcttcttcatttactcttaagtgatacatcaaggaggatgatttggactatactgaagta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcttcttcatttactcttaagtgatacatcaaggaggatgatttggactatactgaagta 440
Query: 240 gcaaacatctggtagctcccaaatcctagtgattcccaatgataaagtttcctgtttact 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcaaacatctggtagctcccaaatcctagtgattcccaatgataaagtttcctgtttact 500
Query: 300 ctacatgcctgctgtacattggtgggccagctctccaccatcactcagagatttaagttc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctacatgcctgctgtacattggtgggccagctctccaccatcactcagagatttaagttc 560
Query: 360 tgttagtgccattccaatagctttagaaagatctttcaatgcaatgcttaggcctggtgt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgttagtgccattccaatagctttagaaagatctttcaatgcaatgcttaggcctggtgt 620
Query: 420 gcgagacagactctttttttctgttcacaatacaagggctgcagttattctgaaggtccc 479
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcgagacagactcttttcttctgttcacaatacaagggctgcagttattctgaaggtccc 680
Query: 480 atccatcacaagaagaccaggaggcaatcttcccatgggccagcaggaaggattggggaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atccatcacaagaagaccaggaggcaatcttcccatgggccagcaggaaggattggggaa 740
Query: 540 atgtgacaaacagcact 556
|||||||||||||||||
Sbjct: 741 atgtgacaaacagcact 757
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 957
Length adjustment: 10
Effective length of query: 546
Effective length of database: 947
Effective search space: 517062
Effective search space used: 517062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
