Query= MSMg01no150_c05.b1 MSMg01no150_c05.b1 CHROMAT_FILE:
MSMg01no150_c05.b1 PHD_FILE: MSMg01no150_c05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:37 2005
(569 letters)
>mm_chr11_30850319_30851286
Length = 968
Score = 1069 bits (553), Expect = 0.0
Identities = 562/565 (99%), Gaps = 1/565 (0%)
Strand = Plus / Minus
Query: 5 gaattcttgaatagatattctaaaatgctaaccactatttataagctatgtagaaaatta 64
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 gaattcttgaataga-attataaaatgctaaccactatttataagctatgtagaaaatta 710
Query: 65 gcccgatagttattacagacctaaataagccctagctctattttacagagccagttagta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 gcccgatagttattacagacctaaataagccctagctctattttacagagccagttagta 650
Query: 125 gaaaccacatatacctcacaagttttgtattttgtgtggcataattttgtgtcacttcat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 gaaaccacatatacctcacaagttttgtattttgtgtggcataattttgtgtcacttcat 590
Query: 185 aaaaatttattccagctgcttaaaattttaggtaaaattcggttgacttatatggctttt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 aaaaatttattccagctgcttaaaattttaggtaaaattcggttgacttatatggctttt 530
Query: 245 gtgtgttaaaaacatacctgtctttttagattgaatcttactggacttatgaggtctgtc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gtgtgttaaaaacatacctgtctttttagattgaatcttactggacttatgaggtctgtc 470
Query: 305 atgggaaacatattcgacagtaccatgaagaaaaagaaactggccaagtatgtttttctt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 atgggaaacatattcgacagtaccatgaagaaaaagaaactggccaagtatgtttttctt 410
Query: 365 taaacataaaccataaaatgagaaatttcacaatgatattgataatttttcaagttgtaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 taaacataaaccataaaatgagaaatttcacaatgatattgataatttttcaagttgtaa 350
Query: 425 caaattaaatatgtttgtaatatactgtactttttttaatgtagaaagtaaatattcatg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 caaattaaatatgtttgtaatatactgtactttttttaatgtagaaagtaaatattcatg 290
Query: 485 aatactaccttgggaatatgttggctaagaatcttctgtatgaaaaaggttagtctctac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 aatactaccttgggaatatgttggctaagaatcttctgtatgaaaaaggttagtctctac 230
Query: 545 catggtgatatactactgggtttgg 569
||||||||||||||||||||||||
Sbjct: 229 aatggtgatatactactgggtttgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 968
Length adjustment: 10
Effective length of query: 559
Effective length of database: 958
Effective search space: 535522
Effective search space used: 535522
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no150_c05.g1 MSMg01no150_c05.g1 CHROMAT_FILE:
MSMg01no150_c05.g1 PHD_FILE: MSMg01no150_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:37 2005
(441 letters)
>mm_chr11_30704943_30705783
Length = 841
Score = 853 bits (441), Expect = 0.0
Identities = 441/441 (100%)
Strand = Plus / Plus
Query: 1 cttttttaaaaaggtttttataagtgtgtatgcatgcacatgtgcgcacacctgtggggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttttttaaaaaggtttttataagtgtgtatgcatgcacatgtgcgcacacctgtggggc 260
Query: 61 tgtctgttggtggacagttggtgggtactggtgcctgaggatgccggaggtatcacatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtctgttggtggacagttggtgggtactggtgcctgaggatgccggaggtatcacatcc 320
Query: 121 ccttgaactggagctatcgctgtgtagtgttttgttttctcagtgcttagtgtattgagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccttgaactggagctatcgctgtgtagtgttttgttttctcagtgcttagtgtattgagg 380
Query: 181 gtggggtgcaggtgtcaggtgcctgtttctccctctgcccgaccaccaaagaccatgtcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtggggtgcaggtgtcaggtgcctgtttctccctctgcccgaccaccaaagaccatgtcc 440
Query: 241 ttttgattcggcaccaggctctgggtaaagcctggcattttcagcaccacaaagtactta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttgattcggcaccaggctctgggtaaagcctggcattttcagcaccacaaagtactta 500
Query: 301 tcttgagccctggaaatggtgatctctcaaacacccccacctagggacaacttcctggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcttgagccctggaaatggtgatctctcaaacacccccacctagggacaacttcctggtg 560
Query: 361 gctacatgtgtgtagcagttctggctcaatctgtaggagcatcatgatggtttcagaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gctacatgtgtgtagcagttctggctcaatctgtaggagcatcatgatggtttcagaaac 620
Query: 421 attaggaagcataaaagaact 441
|||||||||||||||||||||
Sbjct: 621 attaggaagcataaaagaact 641
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
