Query= MSMg01no151_j12.b1 MSMg01no151_j12.b1 CHROMAT_FILE:
MSMg01no151_j12.b1 PHD_FILE: MSMg01no151_j12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:26 2005
(369 letters)
>mm_chr11_70673153_70673921
Length = 769
Score = 681 bits (352), Expect = 0.0
Identities = 361/364 (99%)
Strand = Plus / Minus
Query: 6 gaattccaggcctgcccagaatacccagagaaatcctgtctcaaaattaaaggaaagaaa 65
|||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 gaattccaggccagtcaagaatacccagagaaatcctgtctcaaaattaaaggaaagaaa 687
Query: 66 tgtaacaacttaatggaataaatggttaaaagatctggctggactccgcaaagatgccca 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tgtaacaacttaatggaataaatggttaaaagatctggctggactccgcaaagatgccca 627
Query: 126 gacagcaagtcaacttgtgaaaaaggtgtttaatattacatgtcattaaggaactgctat 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gacagcaagtcaacttgtgaaaaaggtgtttaatattacatgtcattaaggaactgctat 567
Query: 186 ttttactattatgaacatgatacagtagattaacaaaattgggagaatttcgcctttact 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ttttactattatgaacatgatacagtagattaacaaaattgggagaatttcgcctttact 507
Query: 246 aaaagagttacagatcctgctcaaaaaggacattttggtgtgcaatgcatatcacatgtc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aaaagagttacagatcctgctcaaaaaggacattttggtgtgcaatgcatatcacatgtc 447
Query: 306 atgtccacagcattttattcaattacagtacattactgtataatgagcaccagcaaactc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 atgtccacagcattttattcaattacagtacattactgtataatgagcaccagcaaactc 387
Query: 366 tcca 369
||||
Sbjct: 386 tcca 383
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_j12.g1 MSMg01no151_j12.g1 CHROMAT_FILE:
MSMg01no151_j12.g1 PHD_FILE: MSMg01no151_j12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:26 2005
(470 letters)
>mm_chr11_70555010_70555880
Length = 871
Score = 841 bits (435), Expect = 0.0
Identities = 462/471 (98%), Gaps = 1/471 (0%)
Strand = Plus / Plus
Query: 1 ctaggcctctcgtaggaagccatattgttcggctttgctgtttacatatgagctattggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaggcctctcgtaggaagccatattgttcggctttgctgtttacatatgagctattggc 260
Query: 61 tgtcctctgagagcaaagaccatatttatttgtgtagtgctcttattgcctaatttatgg 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 tgtcctctgagagcaaagaccatatttatttgtgtagtgcccttattgcctaatttatgg 320
Query: 121 cagatgttcaactgtctgttgactgaaagaatgactccatttgtatcaggaaagcacagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagatgttcaactgtctgttgactgaaagaatgactccatttgtatcaggaaagcacagt 380
Query: 181 gaccagaggcatagactctgggtttcttgctagagctgtgactatgaacaaatgacttga 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 gaccagaggcatagactctgggtttcttgctagagctgtgactatggacaaatgacttga 440
Query: 241 cttttctgtgacaaagtttccataatggtaaatagaaatatggggacctgcttcaaggta 300
||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 cttttctgtgacaaagttttcataatggtaaatagagatatggggacctgcttcaaggta 500
Query: 301 gcagtggtcacttagccctgagcttagcgcttacgcatttcaccc-ctccacagacagaa 359
|||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||
Sbjct: 501 gcagtggtcacttagccctgagcttagcgcttacgcatttcatctgctccacggacagaa 560
Query: 360 tgtgtttgagcagtaatcgctgtcctcagccctgagacattgcaagttccgagattcttt 419
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtgtttgagcagcaatcgctgtcctcagccctgagacattgcaagttccgagattcttt 620
Query: 420 tcctctctgaattagatttcatcgtcctcgtctgaatcttccctgacagag 470
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcctctctgaattagatttcatcgtcctcgtctgaatcttccctgacagag 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 871
Length adjustment: 10
Effective length of query: 460
Effective length of database: 861
Effective search space: 396060
Effective search space used: 396060
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
