Query= MSMg01no153_e17.b1 MSMg01no153_e17.b1 CHROMAT_FILE:
MSMg01no153_e17.b1 PHD_FILE: MSMg01no153_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:38 2005
(597 letters)
>mm_chr11_65510218_65511214
Length = 997
Score = 1104 bits (571), Expect = 0.0
Identities = 586/591 (99%)
Strand = Plus / Minus
Query: 7 gaattctgcgccattgccatattctcctgtgttcctctgcatctatgttatatgttgtaa 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 gaattctgcgccattgccatattctcctgtgttcctctgcatctatgttatatgttgtaa 687
Query: 67 aaaatagtacctaatttcaaggaaatgcaaaaatattcccttcatggaaattactaaagt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 aaaatagtacctaatttcaaggaaatgcaaaaatattcccttcatggaaattactaaagt 627
Query: 127 ttctgtttgtttgttttctgtttgttttgctgttcataagacaaggtgatatattacaca 186
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tgctgtttgtttgttttctgtttgttttgctgttcataagacaaggtgatatattacaca 567
Query: 187 ttgtgctttaatttggccaaaatgattcataggcatgtatctttaaaggcaatacaagta 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ttgtgctttaatttggccaaaatgattcataggcatgtatctttaaaggcaatacaagta 507
Query: 247 attgggatattcaaagaatattgaaaagaattaaagggcggggtcgtacagtgatgacag 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 attgggatattcaaagaatattgaaaagaattaaagggcggggtcgtacagtgatgacag 447
Query: 307 ttcctgtttttcttttttgtcacaagtaccttgtggtcagtcttctcattgagagcaaag 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ttcctgtttttcttttttgtcacaagtaccttgtggtcagtcttctcattgagagcaaag 387
Query: 367 gctgggaaatcacaatgtagctcttgtcttcccctgccccttcctacttaccagcatttg 426
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 386 gctgggaaatcagaatgtagctcttgtcttcccctgccccttcctatttaccagcatttg 327
Query: 427 ctggaatcagtccttgtaattatttgttttgtccccatcccctttttgccctcctctgac 486
||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 326 ctggaatcagttcttgtaattatttgttttgtccccatcccctttttgctctcctctgac 267
Query: 487 cattctcagctttagctttgccagtgccttgagtattcagagggtctataatgtagtcct 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cattctcagctttagctttgccagtgccttgagtattcagagggtctataatgtagtcct 207
Query: 547 tgtgttatttggggttgctattgctatgatgaaacaccatgaccaacagaa 597
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 tgtgttatttggggttgctattgctatgatgaaacaccatgaccaacagaa 156
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_e17.g1 MSMg01no153_e17.g1 CHROMAT_FILE:
MSMg01no153_e17.g1 PHD_FILE: MSMg01no153_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:38 2005
(657 letters)
>mm_chr11_65387611_65388664
Length = 1054
Score = 1152 bits (596), Expect = 0.0
Identities = 641/658 (97%), Gaps = 5/658 (0%)
Strand = Plus / Plus
Query: 1 ctgctggcctcctt-cgtggtgtacattctacatgtgatagctataagacatgagaacac 59
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 ctgctggcctccttccgtggtgtacattctacatgtgatagctacaagacatgagaacac 260
Query: 60 ctgctgagaacataaccaaaaggagacagcaagaatgagattagtctatgtttgatggta 119
||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 261 ctgctgataacataaccaaaaggagacagcaagaatgagattagtctatgttcaatagta 320
Query: 120 agatctggagaaagagagacacattagcaaaataagaaagcagcaaaaaaatgattcact 179
|||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 agatctagagaaagagagacacattagcaaaataagaaagcagcaaagaaatgattcact 380
Query: 180 aaattaccattattaaaatagagcaatatatttaatatttacatatgccaaatgccatat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaattaccattattaaaatagagcaatatatttaatatttacatatgccaaatgccatat 440
Query: 240 atttaatgtgcaatgtaatatagtgatatggaatattatacattattattaatagcaatg 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 atttaatgtgcaatgtaatatagtgatatggaatattatacattattattaatagcgatg 500
Query: 300 tctgtttgtctgtcagcaatgccaccacatctatcacctacaataacagagtcagattgt 359
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 501 tctgtt----tgtcagcaatgccaccacatctatcacctacaataacagagtcagatcgt 556
Query: 360 gaaactattaaccaatgacatctaccacatgcacgagaccattttcttcatgaaactagt 419
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gaaactattagccaatgacatctaccacatgcacgagaccattttcttcatgaaactagt 616
Query: 420 agttcaaacaggcagtgcagattcaagaaagatagaatgagacatcagaaacacaattaa 479
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 agctcaaacaggcagtgcagattcaagaaagatagaatgagacatcagaaacacaattaa 676
Query: 480 aaacagagtatgaagcaagagtcagtaaaaggacacaggacccaaatgcaccatggtaga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 aaacagagtatgaagcaagagtcagtaaaaggacacaggacccaaatgcaccatggtaga 736
Query: 540 gaagggctaccatgcccagcaaacctgaaggaaaaaactgagaaaaggaagcaaaagtaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 gaagggctaccatgcccagcaaacctgaaggaaaaaactgagaaaaggaagcaaaagtaa 796
Query: 600 caggagatgacacattacagttggtgcccctgcagataactgcagaacaataaaaagc 657
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 caggagatgacacattaaagttggtgcccctgcagataactgcagaacaataaaaagc 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1054
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1044
Effective search space: 675468
Effective search space used: 675468
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
