Query= MSMg01no153_m07.b1 MSMg01no153_m07.b1 CHROMAT_FILE:
MSMg01no153_m07.b1 PHD_FILE: MSMg01no153_m07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:13 2005
(636 letters)
>mm_chr11_22734282_22735318
Length = 1037
Score = 1193 bits (617), Expect = 0.0
Identities = 632/637 (99%), Gaps = 1/637 (0%)
Strand = Plus / Plus
Query: 1 atactgagccccaggacagccaggaccccatagagaccccctcaa-tcaaaaacagaaac 59
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 atactgagccccaggacagccaggaccccatagagaccccctcaaatcaaaaacagaaac 260
Query: 60 aaaaaaaaccagatggcacagctctcaggaagacacacataggtgggaagtgcttttaag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaaaaaccagatggcacagctctcaggaagacacacataggtgggaagtgcttttaag 320
Query: 120 actacagatgcagtgatggctaacccacggacacagactgttaatataatgatgactgtg 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actacagatgcagtgatggctaacccacggacacagactgttaatataatgatgactgta 380
Query: 180 atggtttctgggaaagatagcccagggagaatgtcatgaaacacagggaaacaagaacag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atggtttctgggaaagatagcccagggagaatgtcatgaaacacagggaaacaagaacag 440
Query: 240 aaagattatcacttattatacgtgatgattaaaaaatacaatcactttatttccactttt 299
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaagagtatcacttattatacgtgatgattaaaaaatacaatcactttatttccactttt 500
Query: 300 tcccagtcccctgtagcacaggtgagaaccctctaaagcacaaaaatatttcaagaaagc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcccagtcccctgtagcacaggtgagaaccctctaaagcacaaaaatatttcaagaaagc 560
Query: 360 atgttacaagatattagtatatgcaatattttggcagaactttattttctctagcagttc 419
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgttacaagatactagtatatgcaatattttggcagaactttattttctctagcagttc 620
Query: 420 atacccccccatccaaattttaaaattcaaaaataagagttaactttatctaacatgtta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atacccccccatccaaattttaaaattcaaaaataagagttaactttatctaacatgtta 680
Query: 480 cagcttaacatttaaaacatcatgctggatctgggaggagatggggaggtgaatacaatc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cagcttaacatttaaaacatcatgctggatctgggaggagatggggaggtgaatacaatc 740
Query: 540 aaaacacattgtatgaaattctcaaagaattaaaaatgagaaaaaataaaatatcatgct 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaaacacattgtatgaaattctcaaagaattaaaaatgagaaaaaataaaatatcatgct 800
Query: 600 ctagttaaatatttcacaaacactgtataccaataaa 636
|||||||||||||||||||||||||||||| ||||||
Sbjct: 801 ctagttaaatatttcacaaacactgtatacaaataaa 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1037
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1027
Effective search space: 642902
Effective search space used: 642902
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_m07.g1 MSMg01no153_m07.g1 CHROMAT_FILE:
MSMg01no153_m07.g1 PHD_FILE: MSMg01no153_m07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:13 2005
(631 letters)
>mm_chr11_22873421_22874451
Length = 1031
Score = 1212 bits (627), Expect = 0.0
Identities = 630/631 (99%)
Strand = Plus / Minus
Query: 1 cactggagctgtcgtcctgcgtaccatcttccattaaagagagagagggctgcttggcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 cactggagctgtcgtcctgcgtaccatcttccattaaagagagagagggctgcttggcat 617
Query: 61 tcttcttccgactggtactgaacatacacattgccccgcagatgaggttccaggttgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tcttcttccgactggtactgaacatacacattgccccgcagatgaggttccaggttgcag 557
Query: 121 cttactttgaactgaatcacctttcccacgttcttgaactccggcagcacgtcatggtag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 cttactttgaactgaatcacctttcccacgttcttgaactccggcagcacgtcatggtag 497
Query: 181 aaatccaagaactgctggtaggtctcctcctcactgtactccaggtttgcgtctgagtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aaatccaagaactgctggtaggtctcctcctcactgtactccaggtttgcgtctgagtca 437
Query: 241 tagtcatcccttctgcactgctccattccaaacgttgtaaacatactcttcacaagaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tagtcatcccttctgcactgctccattccaaacgttgtaaacatactcttcacaagaagg 377
Query: 301 gtgggacttgacgtgggaaagtcgtgtttccgtgaacatctgttaccaaatctgcacgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gtgggacttgacgtgggaaagtcgtgtttccgtgaacatctgttaccaaatctgcacgct 317
Query: 361 cccgttttattgtagaagggacaactgggtcgatatttctccagccttaaatccttgggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 cccgttttattgtagaagggacaactgggtcgatatttctccagccttaaatccttgggt 257
Query: 421 ggttccgggttctgccaaatgcgctcattttcagcctggtccagcattttctgcactgct 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 256 ggttccgggttctgccaaatgcgctcattttcagcctggtccagcattttctgcaccgct 197
Query: 481 tcctccctctctctcttctcctgtagcttctgctcctcctcctctctctgttttttctgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 tcctccctctctctcttctcctgtagcttctgctcctcctcctctctctgttttttctgt 137
Query: 541 tgttcttcccactcggcctttatttgtctctcctgttcttccttctgttttctagcggcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 tgttcttcccactcggcctttatttgtctctcctgttcttccttctgttttctagcggcc 77
Query: 601 tcttcctttttcttctttattctgaattctt 631
|||||||||||||||||||||||||||||||
Sbjct: 76 tcttcctttttcttctttattctgaattctt 46
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
