Query= MSMg01no155_g02.b1 MSMg01no155_g02.b1 CHROMAT_FILE:
MSMg01no155_g02.b1 PHD_FILE: MSMg01no155_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:16 2005
(612 letters)
>mm_chr11_23110927_23111939
Length = 1013
Score = 1058 bits (547), Expect = 0.0
Identities = 565/571 (98%), Gaps = 1/571 (0%)
Strand = Plus / Minus
Query: 5 gaattcacagaaaatattccaaagcctctgcgaggtaacttctaat-ccccatgcagttt 63
|||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 571 gaattcacagaaaatatttaaaagcctctgcgaggtaacttctaatcccccatgcagttt 512
Query: 64 tgagccaatcccacccttgaggcagccacgcctcccgggagcagaggtggaggggctcta 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 511 tgagccaatcccacccttgaggcagccacgcctcccgggagcagaggtggaggggcgcta 452
Query: 124 ttgttctgggtttcctttctttgtccactcccgcccctgcctccgctggctagccacctc 183
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 451 ttgttctgggtttcctttctttgtccactcccgcccctgcctccgctgcctggccacctc 392
Query: 184 agccttccccctctgctcggggcctgggttttccctgctcagcccgttagttcacaactc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 agccttccccctctgctcggggcctgggttttccctgctcagcccgttagttcacaactc 332
Query: 244 acagtgttgcacccgtttttaaacttccttttctccaaaaagagcatttctgtagttccc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 acagtgttgcacccgtttttaaacttccttttctccaaaaagagcatttctgtagttccc 272
Query: 304 aaggactgttccgtctaagaataaacactggcattcaagcggagcgaagggatctactta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aaggactgttccgtctaagaataaacactggcattcaagcggagcgaagggatctactta 212
Query: 364 ttggggcttgtttgttttgagacagagtcttaccctgtagctgagactggcctggaactg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ttggggcttgtttgttttgagacagagtcttaccctgtagctgagactggcctggaactg 152
Query: 424 gagagccttctgccttcacctgcagaagtactgggtttacaggtgtgtaccaccaagcca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 gagagccttctgccttcacctgcagaagtactgggtttacaggtgtgtaccaccaagcca 92
Query: 484 actacaacacacttctgtctgagtcgttggcacactctgtagaataaagcaactagtcat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 actacaacacacttctgtctgagtcgttggcacactctgtagaataaagcaactagtcat 32
Query: 544 agtaattggttacttaaaaatttaaaatcaa 574
|||||||||||||||||||||||||||||||
Sbjct: 31 agtaattggttacttaaaaatttaaaatcaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1013
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1003
Effective search space: 603806
Effective search space used: 603806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_g02.g1 MSMg01no155_g02.g1 CHROMAT_FILE:
MSMg01no155_g02.g1 PHD_FILE: MSMg01no155_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:17 2005
(566 letters)
>mm_chr11_22997096_22998062
Length = 967
Score = 650 bits (336), Expect = 0.0
Identities = 384/400 (96%), Gaps = 1/400 (0%)
Strand = Plus / Plus
Query: 168 aaaagaaacatgactactatgtgttagctctcaaaacattttaaaaagttatttgactac 227
||||||||||||| || |||||| ||||||||||| |||||||||||||||||||||| |
Sbjct: 564 aaaagaaacatgaataatatgtgctagctctcaaatcattttaaaaagttatttgactcc 623
Query: 228 tactgcctcccactgtaagactctggtgagccttagcttacc-gggacccccaagtgaac 286
||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 624 tactgcctcccactgtaagactctggtgacccttagcttaccggggacccccaagtgaac 683
Query: 287 catgcagagccagaatcttgcaaaaagcaagaggaatttattgttccagtgcactggggt 346
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 684 catgtggagccagaatcttgcaaaaagcaagaggaatttattgttccagtgcactgggat 743
Query: 347 cgccccaaacccgaaggagaggtggcatcctccagtggcctgtttggaaagtttttatat 406
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cgtcccaaacccgaaggagaggtggcatcctccagtggcctgtttggaaagtttttatat 803
Query: 407 ggtttccaggggcggaagaaagagcatcagcaactaggcacaatatgactggtggaacag 466
||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 804 ggtttccaggggcagaagaaagagcatcagcaactaggcacaatatgactggttgaacag 863
Query: 467 tgagccctttaaacggaacaatctttagggaatgaggtagtaggcgcttgcacagcttct 526
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 864 tgagccctttaaacggatcaatctttagggaatgaggtagtaggggcttgcacagcttct 923
Query: 527 ctattctggcctatatgccctatgacctgtctcttctagg 566
|||||||||||||| |||||||||||||||||||||||||
Sbjct: 924 ctattctggcctatgtgccctatgacctgtctcttctagg 963
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 967
Length adjustment: 10
Effective length of query: 556
Effective length of database: 957
Effective search space: 532092
Effective search space used: 532092
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
