Query= MSMg01no155_o20.b1 MSMg01no155_o20.b1 CHROMAT_FILE:
MSMg01no155_o20.b1 PHD_FILE: MSMg01no155_o20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:56 2005
(352 letters)
>mm_chr11_37125020_37125771
Length = 752
Score = 582 bits (301), Expect = e-170
Identities = 332/347 (95%), Gaps = 9/347 (2%)
Strand = Plus / Minus
Query: 7 gaattccagttggatc-cacagacctagatctttggatatgtttttttttttttttgaca 65
|||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 639 gaattccagttggatcacacagacctagatctttggatatg--------tttttttgaca 588
Query: 66 ggacagccatgatgctggattaaaatttctctatatccttattaataattaaattttgtt 125
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 gggcagccatgatgctggattaaaatttctctatatccttattaataattaaattttgtt 528
Query: 126 atatcaccatatgtagtggcaatttatatatgtatgttgtgttctaattttatataatgg 185
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 atattaccatatgtagtggtaatttatatatgtatgttgtgttctaattttatataatgg 468
Query: 186 aatacagtttgaattaaaaactaactgaaatttgacctctctgaatctgcctctatgaag 245
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 467 aatacagtttgaattaaaaactaactgaaatttgacctctctgaatctgtctctatgaag 408
Query: 246 tttcccctggaggtaaacagcacagacttgatagtctcttatggtctttgtccatgaaca 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 407 tttcccctggaggtaaacagcacagacttgatagtctcttatggtctttgtccatgagca 348
Query: 306 agcttttgcgtgtacttttatggatcattattttctacattcatgag 352
|||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 347 agcttttgcgtgtacttttatgtatcattattttctacattcatgag 301
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 752
Length adjustment: 9
Effective length of query: 343
Effective length of database: 743
Effective search space: 254849
Effective search space used: 254849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_o20.g1 MSMg01no155_o20.g1 CHROMAT_FILE:
MSMg01no155_o20.g1 PHD_FILE: MSMg01no155_o20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:56 2005
(571 letters)
>mm_chr11_36983773_36984743
Length = 971
Score = 1058 bits (547), Expect = 0.0
Identities = 565/571 (98%)
Strand = Plus / Plus
Query: 1 atgaagctcccatacagatcgttttggaatgccaggtcataattaacatacatgtatttt 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 atgaagctcccatacagatcgttttggaatgccaagtcataattaacatacatgtatttt 260
Query: 61 aagtctgcttgtttcttttttttttccttttgtgaactaatttagacctttcactacagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagtctgcttgtttcttttttttttccttttgtgaactaatttagacctttcactacagt 320
Query: 121 tattaatttacaaagtaaacaagaaggtatgaggtctccctaaaacggatgcttttgtat 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 tattaatttacaaagtaaacaagaaggtatgaggtctccctaaaatggatgcttttgtat 380
Query: 181 ttcaaaaggacaatggtcgaacataatggaagacgagttaaaatgcttgcaggatattca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcaaaaggacaatggtcgaacataatggaagacgagttaaaatgcttgcaggatattca 440
Query: 241 aatgggcaaaatggacaatggatagctataagctgtcctctgtttaacttattttattct 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaggggcaaaatggacaatggatagctataagctgtcctctgtttaacttattttattct 500
Query: 301 tctctctttttaaaagaaagcctcatgtatcccaaaccacccccaattccctatgtagat 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 tctctctttttaaaagaaagcctcatgtatcccaaaccatccccaattccctatgtagat 560
Query: 361 ggacataattctgaacatacgatcctcctctctctacccataagtttgccctttcaatta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggacataattctgaacatacgatcctcctctctctacccataagtttgccctttcaatta 620
Query: 421 caaaaatatattcccttactagatatcatgtagaagttaagaaagcacaaatattaacga 480
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 621 caaaaatatattcccttactagatatcatgtaaaagttaagaaagcacaaatattaacga 680
Query: 481 aaacaaaaatagagcatgcataaatacaaacactatttggccaaattgtttaaaattgtt 540
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaacaaaactagagcatgcataaatacaaacactatttggccaaattgtttaaaattgtt 740
Query: 541 cggtagaagagagatagcaacatgcacagat 571
|||||||||||||||||||||||||||||||
Sbjct: 741 cggtagaagagagatagcaacatgcacagat 771
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
