Query= MSMg01no156_n09.b1 MSMg01no156_n09.b1 CHROMAT_FILE:
MSMg01no156_n09.b1 PHD_FILE: MSMg01no156_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:04 2005
(316 letters)
>mm_chr11_121104385_121105100
Length = 716
Score = 603 bits (312), Expect = e-177
Identities = 312/312 (100%)
Strand = Plus / Minus
Query: 5 gaattctaatacacctacaaaaatcaacatcgtagaaggtaacaataaaatgtagtgttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gaattctaatacacctacaaaaatcaacatcgtagaaggtaacaataaaatgtagtgttt 348
Query: 65 cacaaaacatcagtaaaccctatcacatcaagaagttgcagatacaaagaatcaaggagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 cacaaaacatcagtaaaccctatcacatcaagaagttgcagatacaaagaatcaaggagc 288
Query: 125 aatgacacacattgatggggccagatcctcaggcacaccgttgtcaagaaccctgtatgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 aatgacacacattgatggggccagatcctcaggcacaccgttgtcaagaaccctgtatgt 228
Query: 185 atttatctactcatttatgttcgtatatacatacatacacacacacatacatgattagta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 atttatctactcatttatgttcgtatatacatacatacacacacacatacatgattagta 168
Query: 245 catatgcatatatatacatgatggatagttttatgtcaatttgacacaagctagagttgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 catatgcatatatatacatgatggatagttttatgtcaatttgacacaagctagagttgt 108
Query: 305 ctgaaaggaggg 316
||||||||||||
Sbjct: 107 ctgaaaggaggg 96
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_n09.g1 MSMg01no156_n09.g1 CHROMAT_FILE:
MSMg01no156_n09.g1 PHD_FILE: MSMg01no156_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:04 2005
(280 letters)
>mm_chr11_120962202_120962882
Length = 681
Score = 497 bits (257), Expect = e-145
Identities = 275/281 (97%), Gaps = 1/281 (0%)
Strand = Plus / Plus
Query: 1 cttttggctgaagctatgagggaggtgattgtttctcataagctcctgggcctttgtaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttttggctgaagctatgagggaggtgattgtttctcataagctcctgggcctttgtaca 260
Query: 61 tcttggtgtgtatgtatgccagtgtgcattgtacaaccgaagggtatggatta-gcataa 119
|||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||
Sbjct: 261 tcttggtgtgtatgtatgccagtgtgcattgtacaatcaaagggtatggattttgcataa 320
Query: 120 gcaagtcattgtgtgtgctcatgaagtcatgtggattatcagaaagggaatgtgtatgtg 179
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 gcaagtcattgtgtgtgctcatgaagtcatgtggattatcagaaagagaatgtgtatgtg 380
Query: 180 tgcaagtgttccagggacactgtggccatgcggcaggcttccccttatcaggaagaaagg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcaagtgttccagggacactgtggccatgcggcaggcttccccttatcaggaagaaagg 440
Query: 240 tctggatattggtgtgatatctaaagcaataaactggtttt 280
|||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 tctggagattggtgtgatatctaaagcaataaactggtttt 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 681
Length adjustment: 9
Effective length of query: 271
Effective length of database: 672
Effective search space: 182112
Effective search space used: 182112
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
