Query= MSMg01no157_f18.b1 MSMg01no157_f18.b1 CHROMAT_FILE:
MSMg01no157_f18.b1 PHD_FILE: MSMg01no157_f18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:41 2005
(318 letters)
>mm_chr11_3831196_3831913
Length = 718
Score = 594 bits (307), Expect = e-174
Identities = 310/311 (99%)
Strand = Plus / Plus
Query: 5 gaattcagcaagagccccaaagactccagaaaggagcagcagcgccttcaggagctccat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagcaagagccccaaagactccagaaaggagcagcagcgccttcaggagctccat 264
Query: 65 ggcaggcacaggtgggaggtgggagactcctgggtctcaccttgagggcttgtctgactg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggcaggcacaggtgggaggtgggagactcctgggtctcaccttgagggcttgtctgactg 324
Query: 125 caactgttgtcttgcttaggaagaggcagcttcactgattaattgtccttccaacagccg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caactgttgtcttgcttaggaagaggcagcttcactgattaattgtccttccaacagccg 384
Query: 185 gaagcacgctgctaaatcagcagagagaaagggggaaaggtctgttatggagcaggaggc 244
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 385 gaagcacgctgctaaatcagcagagagaaagggggaaaggtctgttatggggcaggaggc 444
Query: 245 caaagaacagaggaaggaaggaagggcagagctgcttgtcctccagatgagaacaaaaag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caaagaacagaggaaggaaggaagggcagagctgcttgtcctccagatgagaacaaaaag 504
Query: 305 ggactccgtgg 315
|||||||||||
Sbjct: 505 ggactccgtgg 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_f18.g1 MSMg01no157_f18.g1 CHROMAT_FILE:
MSMg01no157_f18.g1 PHD_FILE: MSMg01no157_f18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:41 2005
(284 letters)
>mm_chr11_3897043_3897726
Length = 684
Score = 511 bits (264), Expect = e-149
Identities = 279/284 (98%)
Strand = Plus / Minus
Query: 1 cagaccattgtgatctgctatgtgggtgctgggaattgaaccaaggtcctttgaaagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 cagaccattgtgatctgctatgtgggtgctgggaattgaaccaaggtcctttgaaagaat 514
Query: 61 cttaacagctgagctatctccttagctccttgttttgtttcattaaaatcacttactggc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 513 cttaacagctgagctatctccttagctccttgttttgtttcattaaaatcacttcctggc 454
Query: 121 aatgattttcagattaccctagaacggctaaatgaagagcaggtggcaccagatgtatgc 180
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 453 aatgattttcagattaccctagaacggctaaatgaagagcaagcggcaccagatgtatgc 394
Query: 181 tgcgcagcctcacaaggagatgggagagcccagctgcttaagaagagggacacagtcaca 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 393 tgcgcagcctcacaaggagatgggagagcccggctgcttaagaagagggacacagtcgca 334
Query: 241 taggcctaagtttgaaaagtccgaatctggactcttatgccaga 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 taggcctaagtttgaaaagtccgaatctggactcttatgccaga 290
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
