XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACATAC
TGAAAATCGAACGATCATTTTCCATTACACTGATCAATACCTAATAACCA
TAAAGCATCCAGTTACCAAAAACATCTCCTTCAAACAAATGGCAGAATAA
AACAGAAAACACAGAAAGAACCTCCCCCTCATCTCCAAAGCTTCTACAAG
TTAGAAACAAAACGTTACAAGTTTTCAGTGAGTTCATCAGTTTGCTTGCT
ATCTGGATATTAAATGTGCTTCAAATTGAAAAAGATCTCAGAAGATGGAA
AGATTTCCCATGCTCATGGATTGGCAGGGTTAATATTGTCAAAATGGCTA
TCCGGTCGACCNAATCTANACACTCATTGCAATCCCCTTCAAAATTCCAA
CTCAATTCCTCACAGAAAAAAAAAGAGACAATTTGCAAATTCATCTGGAA
TAACAAAAAAAAATCTAGGATAGCAAAAACTATTCTCAACAATAAAAGAA
CCTCTGGTGGAATCATCATGCTTGACCTCAAGCTGTACTACAGAACAATT
GTGATAAAAACTGCATGGTACTGGTACAGTGACAGACATGTAGATCAATG
GAATAAAACTGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGA
TCTTTGACAAGGGAGCTAAAACCATCCAGTGGAAAAAAGACAGTGTTTTC
AA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTTTAGTCCCCATGATGGATCACTGTAACCAGGTAA
GTAGAATAGAGCCCGATGTAAGAAAAGTATGTAGGCTTTAGAGTTGCTAC
AGTCTCAATGTGAGTCACGCATCCCAATTTCCTGCAGGCCACTGTTGGAA
ACTGATTTCAGAGTTTCCATTTTCTTACCTATAAATATTAGAGGGACTTG
CAGGGGGGATGGAAAGGTGAGCAAAATACACATGAGACACAATCACTCCT
ACTTGCACACCTATGGCAGTTAGCCAGAACATTTGTTCCTTTCTTCATCT
CTTTCATGCTTCCTNTCAAACTGCGCAGATTGGCCATTTTCATAGTGAAA
TCCTACCCACATTCCAATAAAATGCTGCCCAGACCTTCTAGAGACCATAA
GAGTCTATTCCCAGTTATTCACTGCTGAACATGTGGGGAGGAACCTGGGA
GGGGGTTAGAAGTGACGGGGAATAGAGAAAGAAAGCTATTTTCTATAGAC
TCAGACAAGTTTCAGACAGGAGACAGGCTCTNCAACAATGAGGTCATCTC
CCCGGTCTGACAAAGTAGGTGTTCAAGACATAAAACCAGAGGAAAGGCAG
GAGCATGTGTTTGAGGTAAATGGGGCTCTACATTACACCACCCTTGTGAG
G

Query= MSMg01no158_c16.b1 MSMg01no158_c16.b1 CHROMAT_FILE:
MSMg01no158_c16.b1 PHD_FILE: MSMg01no158_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:39 2005
         (319 letters)



>mm_chr11_47580684_47581402
          Length = 719

 Score =  586 bits (303), Expect = e-172
 Identities = 312/315 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcacatactgaaaatcgaacgatcattttccattacactgatcaatacctaataac 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacatactgaaaatcgaacgatcattttccattacactgatcaatacctaataac 264

                                                                       
Query: 65  cataaagcatccagttaccaaaaacatctccttcaaacaaatggcagaataaaacagaaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cataaagcatccagttaccaaaaacatctccttcaaacaaatggcagaataaaacagaaa 324

                                                                       
Query: 125 acacagaaagaacctccccctcatctccaaagcttctacaagttagaaacaaaacgttac 184
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acacagaaagaacctccccgtcatctccaaagcttctacaagttagaaacaaaacgttac 384

                                                                       
Query: 185 aagttttcagtgagttcatcagtttgcttgctatctggatattaaatgtgcttcaaattg 244
           |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagttttcagcgagttcttcagtttgcttgctatctggatattaaatgtgcttcaaattg 444

                                                                       
Query: 245 aaaaagatctcagaagatggaaagatttcccatgctcatggattggcagggttaatattg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaaaagatctcagaagatggaaagatttcccatgctcatggattggcagggttaatattg 504

                          
Query: 305 tcaaaatggctatcc 319
           |||||||||||||||
Sbjct: 505 tcaaaatggctatcc 519


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space:   220100
Effective search space used:   220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no158_c16.g1 MSMg01no158_c16.g1 CHROMAT_FILE:
MSMg01no158_c16.g1 PHD_FILE: MSMg01no158_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:39 2005
         (287 letters)



>mm_chr11_47710818_47711504
          Length = 687

 Score =  540 bits (279), Expect = e-158
 Identities = 285/287 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttagtccccatgatggatcactgtaaccaggtaagtagaatagagcccgatgtaagaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tttagtccccatgatggatcactgtaaccaggtaagtagaatagagcccgatgtaagaaa 428

                                                                       
Query: 61  agtatgtaggctttagagttgctacagtctcaatgtgagtcacgcatcccaatttcctgc 120
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 427 agtatgtaggctttagagttgctacagtctcaatgtgagtcacgcaccccaatttcctgc 368

                                                                       
Query: 121 aggccactgttggaaactgatttcagagtttccattttcttacctataaatattagaggg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aggccactgttggaaactgatttcagagtttccattttcttacctataaatattagaggg 308

                                                                       
Query: 181 acttgcaggggggatggaaaggtgagcaaaatacacatgagacacaatcactcctacttg 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 307 acttgcaggggggatggaaaggtgagcaaaatacacatgagacacaatcactcctactgg 248

                                                          
Query: 241 cacacctatggcagttagccagaacatttgttcctttcttcatctct 287
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 cacacctatggcagttagccagaacatttgttcctttcttcatctct 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space:   188484
Effective search space used:   188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)